PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Publication

Basic Information? help Back to Top

TF ID

Vun001414

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

G2-like

Protein Properties

Length: 371aa MW: 41306.7 Da PI: 6.4007

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45813166	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-18635	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.3	1.3e-31	210	265	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W++eLH+rF++a++qLGG++ AtPk+i+elmkv+gLt+++vkSHLQk+Rl+ Vun001414 210 KQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLH 265 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.094	207	267	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.8E-28	207	268	IPR009057	Homeodomain-like
SuperFamily	SSF46689	5.2E-18	207	268	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.1E-27	210	265	IPR006447	Myb domain, plants
Pfam	PF00249	1.2E-6	212	262	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence Send to blast
MGFREYIEAL EEERRKIQVF PKELPLSLEL VTQAIEGCRQ QLSGTVTEYN LNGQSECSEQ 60 TSTDEGPVFE EFIPIKKRAS QDSVEEEEEE EEEEENEDED EQHSHHHKKT TSDKKKSDWL 120 RSVQLWNPNP PPTKEDVPRK ANVVEVKRNG GAFQPFQREE KSVVVNGKAN NYAPAIGKAP 180 SSPPVPATSS TGPVRIIDSK KEEKGQTQRK QRRCWSQELH KRFLHALQQL GGADSATPKQ 240 IRELMKVDGL TNDEVKSHLQ KFRLHTRRSP IMHNNGNSQA APLFLVGNIF VQPPEYGAVA 300 TSTASGGELT TVTAPTGIYT PVAAHPPPVT NTPIMNHSHS QERPNNNHSA QSNSPASSSS 360 THTITTTSYV P

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence Send to blast

MGFREYIEAL EEERRKIQVF PKELPLSLEL VTQAIEGCRQ QLSGTVTEYN LNGQSECSEQ  60
TSTDEGPVFE EFIPIKKRAS QDSVEEEEEE EEEEENEDED EQHSHHHKKT TSDKKKSDWL  120
RSVQLWNPNP PPTKEDVPRK ANVVEVKRNG GAFQPFQREE KSVVVNGKAN NYAPAIGKAP  180
SSPPVPATSS TGPVRIIDSK KEEKGQTQRK QRRCWSQELH KRFLHALQQL GGADSATPKQ  240
IRELMKVDGL TNDEVKSHLQ KFRLHTRRSP IMHNNGNSQA APLFLVGNIF VQPPEYGAVA  300
TSTASGGELT TVTAPTGIYT PVAAHPPPVT NTPIMNHSHS QERPNNNHSA QSNSPASSSS  360
THTITTTSYV P

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027911411.1	0.0	transcription factor HHO2-like
Swissprot	Q9FPE8	1e-84	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A4D6LNV9	0.0	A0A4D6LNV9_VIGUN; Two-component response regulator ARR-B family
STRING	XP_007153350.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	4e-76	G2-like family protein

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]