PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun001281
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ARR-B
Protein Properties Length: 383aa    MW: 42051.8 Da    PI: 6.0958
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45875549PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-8240PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.92.3e-28205258155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                kpr++W+ eLH++Fv+av+qL G +kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  Vun001281 205 KPRVVWSVELHQQFVSAVNQL-GLDKAVPKRILELMNVPGLTRENVASHLQKFRL 258
                79*******************.********************************8 PP
2Response_reg761.4e-25241321109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vdD+ + +++++q+  + +y +v+++++++ al+ll+e++  +D++l D+ mp+mdG++ll++   e  +lp+i++++ ++ + + + ++ Ga 
     Vun001281  24 VLVVDDDATTLRIIEQMSIRCRY-RVTTCTEATVALNLLRERKgcFDVVLSDVHMPDMDGYKLLEHVGLEM-DLPVIMMSGDSTTSAVMKGIRHGAC 118
                   89*********************.*******************************************6644.8************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +eel++
     Vun001281 119 DYLIKPVREEELRN 132
                   ************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363921.6E-1464362IPR017053Response regulator B-type, plant
Gene3DG3DSA:3.40.50.23008.5E-4021155No hitNo description
SuperFamilySSF521724.55E-3421145IPR011006CheY-like superfamily
SMARTSM004484.9E-2922134IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011040.38723138IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.2E-2224133IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.11E-2525137No hitNo description
SuperFamilySSF466897.7E-20202262IPR009057Homeodomain-like
PROSITE profilePS5129410.504202261IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.9E-30202263IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-24205258IPR006447Myb domain, plants
PfamPF002491.2E-7207256IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MAPSRSAADA CKGGTAEFPA GLRVLVVDDD ATTLRIIEQM SIRCRYRVTT CTEATVALNL  60
LRERKGCFDV VLSDVHMPDM DGYKLLEHVG LEMDLPVIMM SGDSTTSAVM KGIRHGACDY  120
LIKPVREEEL RNIWQHVVRK IWNENKEHDN SGSMEDSDWN IRGNDDIEYT SVADEAEVVK  180
APKKRSSLKE EDIELESDDP ATSKKPRVVW SVELHQQFVS AVNQLGLDKA VPKRILELMN  240
VPGLTRENVA SHLQKFRLYL KRLSGVAQQQ NGMLNGVPGT IESKLSATGR FDIQALAAAG  300
HVPPETLAAL HAELLGRPAT NIMSTADQAT LLQASIGLKH SHAEHAVAYG QPFVKCPSNI  360
GKDFPPSFLT ANDVSTGYGA WPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-22203264364ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027914131.10.0two-component response regulator ORR21-like
SwissprotQ8H7S71e-142ORR21_ORYSJ; Two-component response regulator ORR21
TrEMBLA0A4D6LL830.0A0A4D6LL83_VIGUN; Two-component response regulator ARR-B family
STRINGGLYMA02G09451.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-117response regulator 2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]