PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun000943
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 428aa    MW: 48934.6 Da    PI: 7.729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45874195PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-21057PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.72.1e-13179230155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Vun000943 179 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 230
                79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.28E-13177234No hitNo description
PROSITE profilePS5088815.751178229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.11E-17178245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-10179230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-13179244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10184235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MERLQGPLNS CFFGDPLGVN CLDQVLVDEE TLRLEEEERF LISSLEDKMP FLQMLQSVES  60
PQFFPFKEPN FQTLLRLQHI KKPWEEMTYV PRMEAQVQAA LELESCVTHD MLEMQSPVKS  120
ESNELQHPLS CVEKVSYECN QEPQKVSQSC PKSQPAATRE RRKRKRTRPS KNKEDVENQR  180
MTHIAVERNR RRQMNDHLSV LRSLMPPSYI QRGDQASIIG GAIDFVKELE QLLQSLEAQK  240
RMRKNEEGGG SSSSVLCKPP PTPSSSSPHG YGMRSSSSEE VNCGDEMKAE NKSETADIKV  300
TLIQTHVNLK IECQRKPGQL IKVIVALEDL RLTILHLNIT SSETSVLYSL NLKIEKGCNL  360
RSASDIAEAV HHIFNFINGS XESTLALSLR EWQQRNKGRI IARKMGKRGT QGIHFLSSYQ  420
YEVYNVRW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160165RRKRKR
2179190RMTHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027906721.10.0transcription factor bHLH57-like isoform X1
TrEMBLA0A4D6MPB70.0A0A4D6MPB7_VIGUN; Transcription factor MYC2
STRINGXP_007135328.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.16e-68bHLH family protein