PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

Vun000915

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bHLH

Protein Properties

Length: 434aa MW: 47888.1 Da PI: 5.4906

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45935401	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-4123	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.5e-12	362	406	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++Er RR ri +++ +L++l Pk+ k s a++L +AveYIk+L Vun000915 362 SIAERVRRTRISERIKKLQDLFPKS----EKQTSTADMLDLAVEYIKDL 406 689*******************8....577*************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.57	356	406	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	8.9E-15	359	423	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.57E-11	360	411	No hit	No description
Gene3D	G3DSA:4.10.280.10	6.9E-14	361	419	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	8.9E-11	362	412	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.6E-9	362	406	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence Send to blast
MSVMYSPVFK YSDVELQIRK NQEMDSSIGN PQQHCHQPNS GLLKYCSAPS SLLASLVDNN 60 ILDCVNEESF TSEIHQHYAP STSSEMNTML SNNGWNNSEA LQEFGSKPVK QEIGESVPQG 120 PPQQNEYSYG DSQLIYQSEQ IQGLSNASSS ASYGGSFGVL NSMASENPLQ SKMGARNCSN 180 LFRQKSSPAG FFSIENDLAA LREVGGFKGN DVSNRQAITS TSGLSSSLAF SSRPSSGLKQ 240 MPQIAEDGKE SLQENCDQSR ILVNEDGDSK FYIPSFTTDI WETSSFNAPK TESDDEIMFS 300 TSNGLESQES DFSYQNLGLT HHLSLPTSST KMSSSIEKFL EVQGSVPCKI RAKRGFATHP 360 RSIAERVRRT RISERIKKLQ DLFPKSEKQT STADMLDLAV EYIKDLRQQV KVLSDCKAKC 420 KCTSTENHCT RTCA

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence Send to blast

MSVMYSPVFK YSDVELQIRK NQEMDSSIGN PQQHCHQPNS GLLKYCSAPS SLLASLVDNN  60
ILDCVNEESF TSEIHQHYAP STSSEMNTML SNNGWNNSEA LQEFGSKPVK QEIGESVPQG  120
PPQQNEYSYG DSQLIYQSEQ IQGLSNASSS ASYGGSFGVL NSMASENPLQ SKMGARNCSN  180
LFRQKSSPAG FFSIENDLAA LREVGGFKGN DVSNRQAITS TSGLSSSLAF SSRPSSGLKQ  240
MPQIAEDGKE SLQENCDQSR ILVNEDGDSK FYIPSFTTDI WETSSFNAPK TESDDEIMFS  300
TSNGLESQES DFSYQNLGLT HHLSLPTSST KMSSSIEKFL EVQGSVPCKI RAKRGFATHP  360
RSIAERVRRT RISERIKKLQ DLFPKSEKQT STADMLDLAV EYIKDLRQQV KVLSDCKAKC  420
KCTSTENHCT RTCA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027942694.1	0.0	transcription factor bHLH130-like
Refseq	XP_027942702.1	0.0	transcription factor bHLH130-like
TrEMBL	A0A4D6M5P9	0.0	A0A4D6M5P9_VIGUN; Phytochrome-interacting factor 3
STRING	XP_007149053.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	3e-43	bHLH family protein