PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun000203
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 375aa    MW: 40735.6 Da    PI: 10.3983
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45936718PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-14170PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.79.6e-1667153186
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                +W++  + +Li+a  e+  +l+rg+lk+++W+ev++ +      ++  ++ +qCk++++ ++k+yk +k+    +   ++s++p+fd+l+
  Vun000203  67 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVsgreDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAG---ATSKWPFFDRLD 153
                7*************************************854334444556679*****************99986...6779******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.3E-2665155No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MDDEEEIQSH PSPASGSPVS SPRANGRITV TVAAPAPANS LALALPIQQP VKGNGGGGGG  60
GGGREDCWSE GATAVLIDAW GERYLELSRG NLKQKHWKEV ADIVSGREDY TKAPKTDIQC  120
KNRIDTVKKK YKSEKAKIAA GATSKWPFFD RLDKLIGPSA KIPGAGGSSG AVGTSAAGNS  180
ILQSQKVPLG IPVGVRDVVN QYHRPQRPAQ QQQPQPVPLK NQKIQFRRRG PPLESDSDER  240
GASSPASSDS FPPESFERKR PRVMSSNAGK GSEGRRRAKG WGSAVRELTQ AILKFGEAYE  300
HAESSKLQQV VEMEKQRMKF AKDLELQRMQ FFMKTQLEIS QLKLGRKGAN PSNNHHSTTT  360
INNNNNNHNN NSDSE
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027908037.10.0trihelix transcription factor ASIL2-like
SwissprotQ9LJG81e-104ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A4D6MR120.0A0A4D6MR12_VIGUN; Uncharacterized protein
STRINGXP_007135401.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.15e-48sequence-specific DNA binding transcription factors