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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vradi11g11680.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
C2H2 |
Protein Properties |
Length: 238aa MW: 25960.8 Da PI: 7.6669 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vradi11g11680.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 12.6 | 0.00043 | 83 | 105 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C + F ++ L H++ H
Vradi11g11680.1 83 FSCNYCRRKFFSSQALGGHQNAH 105
89*****************9988 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MELHIATSKL DKRSGSSVYA SQDYLDNSSS SCLTKTDPDS GSLSLDLTLK FNHSDEEFKG 60 ESHTNSEVGG ETHPSALAVP RVFSCNYCRR KFFSSQALGG HQNAHKRERT MAKRALRMGI 120 LTERYTSLAS LPLHGSSCRS LGLEAHASIH QGQVQSVRVP EIGVGAKFEK DYFRTPIFVE 180 DDDDGLFWPG SFRKTEGRGG FGVNLRHDAD AFNSSTRFVA TAAPAQTSAT PDLTLRL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |