 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi11g10580.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
WRKY |
| Protein Properties |
Length: 480aa MW: 52362.5 Da PI: 7.9327 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi11g10580.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 94.7 | 6.7e-30 | 160 | 219 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt + Cpv+k+v+r+aed +++++tYeg Hnh+
Vradi11g10580.1 160 MNDGCQWRKYGQKMAKGNPCPRAYYRCTVSpLCPVRKQVQRCAEDMSILITTYEGIHNHP 219
58**************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 480 aa
Download sequence Send
to blast |
MQVQKLESAK KVLEEAREEN KMLKFLDILQ QGNSANAKGV TSHEESEESE LVSLSLGISL 60
KGKTKGERKH CKREDEGMDK GLRLGLDINL DPVDHAEAAN VSSTASSSGE GGKEEEPSEM 120
WPPSKVLKAM KNVDKTEASQ NDQPKKTRVS IRARCDTQTM NDGCQWRKYG QKMAKGNPCP 180
RAYYRCTVSP LCPVRKQVQR CAEDMSILIT TYEGIHNHPL PISATAMACT TSAAASMLQS 240
PSLSSQHGHG LVNSAISSIT NFTAPNYNLH NALNFSTYHV SRPHQFYFPN SSISSLNSHP 300
TITLDLTAPP TSSNLNISSG FSPLQSSMSP SPWSSYSSYF NSGAPTHDRN HGDYLLNTGH 360
QNRPYLEHLH HPICTSNNNF SQRSLPDSII AATKAITSNP KFQSVLATAL TTYVGNEAGG 420
GRLRENHVLE NAELNLKLCS ENTIGCASSR YLNVSSSALN PQQGNSSIFP LPSLPEQWK*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
