 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi11g10450.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
MYB_related |
| Protein Properties |
Length: 256aa MW: 28322.4 Da PI: 9.3153 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi11g10450.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 36.1 | 1.5e-11 | 2 | 32 | 14 | 46 |
HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqk 46
+a++ +G++ W+ Iar ++ gRt++ +k++w+
Vradi11g10450.1 2 QAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 32
79*******.*********.***********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MQAHRIYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE QSSAYRRRRM SQSVYKRVEQ 60
NPTFVCSRDN ASTTEQEPSP SYCLNLLHNG VGVTNNLASF PSFHGVGSGE VVDFGLNGSL 120
QNINGVREAM SNTLQVGLRA QAQQAPFDFF SGGGRNDMTG ESNGEIRSWE RSNESVESGL 180
YPDYPQQYLR AMQQLENKTR KNFYSFLNSS WASGSTGKEA SSSACVAGKR DKVVNSDPPD 240
GVPPPFFDFL GVGAT*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
