 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi10g11790.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
GeBP |
| Protein Properties |
Length: 262aa MW: 29032.2 Da PI: 10.1502 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi10g11790.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 103.6 | 1.6e-32 | 12 | 111 | 1 | 98 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92
k+fqrlwseeDe+++L+Gl df++ktg++p + +af++f+kks++++v+++ql eK rrLKkK++ k +s + fsk+hd+k+fels
Vradi10g11790.1 12 KKFQRLWSEEDELAILKGLADFTTKTGQDPLKfaGGNAFHDFLKKSLHVEVTSNQLKEKARRLKKKYEIAAVKGNSADGLIFSKPHDKKTFELS 105
68**************************88765599********************************************************** PP
DUF573 93 kkiWgs 98
kk+Wgs
Vradi10g11790.1 106 KKVWGS 111
****95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MEEGKKSGDQ MKKFQRLWSE EDELAILKGL ADFTTKTGQD PLKFAGGNAF HDFLKKSLHV 60
EVTSNQLKEK ARRLKKKYEI AAVKGNSADG LIFSKPHDKK TFELSKKVWG SEQDGGVANG 120
AVEKPKANGS AAKSPKKKET GSRNVASAKK AKPEPKQETV PATRTEFKES EKMHIDQKPV 180
NCEVSMFLHA VSHFKEGLGV CGLDEEGVKK GLELIGESKR TELRAKWKKL QRTELELFAN 240
RSELIGEQTK LIVEALQSSN H*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G25210.1 | 1e-29 | DNA-binding storekeeper protein-related transcriptional regulator |
