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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vradi10g10070.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
G2-like |
Protein Properties |
Length: 367aa MW: 41367 Da PI: 9.0514 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vradi10g10070.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 86.6 | 2.4e-27 | 88 | 138 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtpeLH++Fv++ve+LGG AtPk +l+lm+v+gL+++hvkSHLQ+YR+
Vradi10g10070.1 88 PRLRWTPELHHSFVHVVERLGG---ATPKLVLQLMNVQGLSIAHVKSHLQMYRS 138
8*******************99...89**************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MSEGHEIHNN EESSSGCSQK CSSFDLNAEA CSDDNTNGTT GDGYELTTNE NNIEKVNDEG 60 TSANGSSISR EGNARRGTVR QYVRSKMPRL RWTPELHHSF VHVVERLGGA TPKLVLQLMN 120 VQGLSIAHVK SHLQMYRSKK LDEAGQVLSQ TYRWNQNQKL RRSVILHESM SPQQHLKMGN 180 GGIILATQFN KHCHFPSLMD TPFPLSSSHT NDTDSRQQQW YINHQSFRKS IASGHIQAKD 240 TTTRPSKLLE EKSWIPLEIK SNHQSKFQKL AANVAPKNNG SQAVQLAEWS FVNKTSVREY 300 LSNKSNEPRN YSNNLKLDFD PPFRIKKDEQ EVPNLQLGLS YTVASDGGKM DHYRENQEIS 360 TKLSLS*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 7e-15 | 89 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-15 | 89 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 7e-15 | 89 | 140 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 7e-15 | 89 | 140 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 7e-15 | 89 | 140 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 7e-15 | 89 | 140 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-15 | 89 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-15 | 89 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-15 | 89 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-15 | 89 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-15 | 89 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-15 | 89 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 1e-163 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |