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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vradi07g16260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
HSF |
Protein Properties |
Length: 176aa MW: 20803.8 Da PI: 7.8092 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vradi07g16260.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 110.7 | 1e-34 | 8 | 102 | 2 | 102 |
HHHHHHHHHC...TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS
HSF_DNA-bind 2 Flkklyeile...deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkke 92
Fl k+y++le +e++++++sw+e+g+ fvv+ + ef+++ Lp+yFkh+nf+SF+RQLn+YgFkk+++++ weFkh++F++g ++
Vradi07g16260.1 8 FLLKTYDLLEegeSEDMTRIVSWNEEGSGFVVWSPAEFSEHTLPRYFKHNNFSSFIRQLNTYGFKKMSSKR---------WEFKHEKFQRGCRH 92
9********977778999**************************************************999.........************** PP
XXXXXXXXXX CS
HSF_DNA-bind 93 llekikrkks 102
+l +i rkk
Vradi07g16260.1 93 MLGEITRKKC 102
*******986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MNRCPAPFLL KTYDLLEEGE SEDMTRIVSW NEEGSGFVVW SPAEFSEHTL PRYFKHNNFS 60 SFIRQLNTYG FKKMSSKRWE FKHEKFQRGC RHMLGEITRK KCEPSVFPAY LKSSSEENAT 120 EENNQQLLME ENKNLKKERL ELQMQIEECK ALEIKLLACL SQFMDTQQTK IRRLC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-141 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |