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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vradi07g06540.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
ERF |
Protein Properties |
Length: 229aa MW: 25837.9 Da PI: 4.9594 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vradi07g06540.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.1 | 4.5e-18 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y GVr+++ +grWvAeI+d ++ r +lg+++ ae+Aaka+++a++ l+g
Vradi07g06540.1 42 RYIGVRQRP-SGRWVAEIKDtI----QNIRLWLGTYDNAEDAAKAYDEAARLLRG 91
799******.7*********33....35***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MANKRKRWEK KSEEGNTEWE KLREEAASMA AAILGARRAN KRYIGVRQRP SGRWVAEIKD 60 TIQNIRLWLG TYDNAEDAAK AYDEAARLLR GANTRTNFFP SQSSPYVSAL PPKGSGEDFS 120 LGYNFAENVY DEEKKIVSGK GCDFQFLESG GSVSYSFSPF EIAEEMVGAI EENKYYDVDD 180 SALGRETLMM KYERKFSACF YTLTGVSECL RLQVGQENGK ELENFLGW*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-165 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |