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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vradi07g03280.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
G2-like |
Protein Properties |
Length: 400aa MW: 44200.2 Da PI: 8.4787 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vradi07g03280.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 102.9 | 1.9e-32 | 257 | 312 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv+a+++LGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
Vradi07g03280.1 257 KQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 312
79****************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MGSVLPELSL DLRPSFVPKT ITDFLRHLSS ATDRLATLHD FLARLEDELR KIHAFKRELP 60 LSMLLLNDAI SLLKTESQKC GPPDSSPVLE EFIPLKKEYD RNEGNNSNDN DMDNECRDKK 120 NWLSSVQLWN NSTTASDRKH QQLHTLENKK IEEGQYVGED PFQSCSNING GRRAFLPFSR 180 YSSSSSSVPV ATAGLAAATK EEKEESVMNR LSLQNPSVKE GCGSRGSRSS SNRAVSSSPP 240 TVHPSLRASS LQQTARKQRR CWSPELHRRF VNALQKLGGS QAATPKQIRE LMQVDGLTND 300 EVKSHLQKYR LHTRRVPAGS GNQPVVVLGG LWMSQDQYND SSKVSSSGSG SPQSPLHLTT 360 GSRGGTSPTE GDSMEDDEDA RSESYSWKSH MHKPGKVDV*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 1e-13 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-13 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-13 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-13 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |