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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vradi07g00380.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
GRAS |
| Protein Properties |
Length: 333aa MW: 36570.4 Da PI: 9.2117 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi07g00380.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 261.3 | 3.4e-80 | 3 | 331 | 36 | 374 |
GRAS 36 dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLl 129
+p++R+a++f+ AL++ l++s + + +s + +++++ +k+fs +sPi+ fs +t+Nqa+le ++g++ vH+iDf+i+ G+Q+++L+
Vradi07g00380.1 3 KPLHRAAFHFKDALHSILSGSNRAAS----NRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLM 92
799****************9444444....4444444589****************************************************** PP
GRAS 130 qaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles 222
+++a++++g+ lRiT+v+++e + e + ++e+L++fA+ lg++++ +++ +++e++++++ r+ gE++aV l+ +++ l +s+
Vradi07g00380.1 93 KEIAEKAAGASlLLRITAVVPEE--YAVESRLVRENLNQFAHDLGIRVQVDFVPLRTFEAVSFKAVRFVDGEKIAVLLSPAIFCRL---GSIGA 181
*******777669********66..99999**********************9999***************************999...66666 PP
GRAS 223 erdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklpres..eerikvErellgreivnvvacegaerrerhet 311
++L v+++ P vvv+v+ e ++ ++sF ++++++le+ys+++dsl+a++++ e+ + +E ll+++i +v + ++
Vradi07g00380.1 182 SVGAFLADVRRMAPGVVVFVDGEgwTEAtAAASFRRGVVNSLEFYSMMLDSLDASVAAGGggEWVRRIEMLLLRPKIFAAVESARRR------- 268
666********************553334677***********************9998888999*************999877665....... PP
GRAS 312 lekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
Wre++ aG++pv+ls++a qa++ll+kv+ +g++ve+++++lvl+W++r++v++SaWr
Vradi07g00380.1 269 SPPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVEKRHAELVLCWHERAMVATSAWR 331
89************************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MAKPLHRAAF HFKDALHSIL SGSNRAASNR LSSMAEIVQT IKTFKAFSGI SPIPMFSIFT 60
TNQALLETLN GSSFVHVIDF EIGLGIQYAS LMKEIAEKAA GASLLLRITA VVPEEYAVES 120
RLVRENLNQF AHDLGIRVQV DFVPLRTFEA VSFKAVRFVD GEKIAVLLSP AIFCRLGSIG 180
ASVGAFLADV RRMAPGVVVF VDGEGWTEAT AAASFRRGVV NSLEFYSMML DSLDASVAAG 240
GGGEWVRRIE MLLLRPKIFA AVESARRRSP PWREAFYGAG MRPVQLSQFA DYQAECLLAK 300
VQIRGFHVEK RHAELVLCWH ERAMVATSAW RC*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
