 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vradi06g11700.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
GRAS |
| Protein Properties |
Length: 523aa MW: 58564.9 Da PI: 4.5242 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi06g11700.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 409.2 | 4e-125 | 175 | 504 | 2 | 333 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
++lL+ecA+a+s+g+ e+a++++++l++++s +g+p qR+aay++e+Laar+a+s++ +y+al+++e + ss++laa+++++ev+P++kf++
Vradi06g11700.1 175 KQLLYECARALSEGNEEQAKSMINNLRQMVSIQGEPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPP---SSDRLAAMQILFEVCPCFKFGF 265
589*****************************************************************9...9********************* PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
++aN aI+eav e++vHiiDfdisqG+Q+++L+q+Las p+ p++R+Tgv++pe++ s ++ +g+rL+k+Aeelg++fef++ va++++
Vradi06g11700.1 266 IAANGAIVEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRRPHVRLTGVDDPETVqrSVGGMNIIGKRLEKLAEELGLSFEFRA-VASKTS 358
********************************************************99889999***********************.7***** PP
GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
+++++L+++pgEal+Vn+++qlh++ de+vs+ +erd++L+lvksl+Pk+v++veq++++n+++Fl+rf+ea +yysa+fd+l+a+lpres++
Vradi06g11700.1 359 IVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRLVKSLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQD 452
********************************************************************************************** PP
GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplseka 333
r++vEr++l+++ivn+vaceg++r+er e ++kWr+rl++aGF+p p+s+++
Vradi06g11700.1 453 RMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPCPMSTNI 504
*************************************************987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 523 aa
Download sequence Send
to blast |
MYITDSYSSE NYEKYFRDSP SEELIEPSSS SISGNSVHPD SSYFLRASSG ASVIVNNPFD 60
SRILSTRRHN AYQSSFESDF LENRSPDGLD FDGEMRLKLQ ELERALFSDE EEEEDIFETV 120
QSMDIDPDMA EWANPLQGML LHDSPKESSS SDSSNISSIS STTKETSQNS PQTPKQLLYE 180
CARALSEGNE EQAKSMINNL RQMVSIQGEP SQRIAAYMVE GLAARVASSG KCIYQALRCK 240
EPPSSDRLAA MQILFEVCPC FKFGFIAANG AIVEAVRDEK KVHIIDFDIS QGTQYITLIQ 300
TLASMPGRRP HVRLTGVDDP ETVQRSVGGM NIIGKRLEKL AEELGLSFEF RAVASKTSIV 360
SPSMLNCRPG EALVVNFAFQ LHHMRDETVS TVNERDQLLR LVKSLNPKLV TIVEQDMNTN 420
TSPFLQRFVE AYNYYSAVFD TLDATLPRES QDRMNVERQC LAKDIVNIVA CEGEDRIERY 480
EVAGKWRARL TMAGFTPCPM STNIEIMEVL EALPLRIAYV EP*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
