 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vradi05g21620.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
EIL |
| Protein Properties |
Length: 454aa MW: 50138.2 Da PI: 8.0337 |
| Description |
EIL family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi05g21620.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | EIN3 | 169.8 | 3e-52 | 19 | 283 | 154 | 353 |
SSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHH CS
EIN3 154 hcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfall 247
cdpp rr+pl+kg++pPWWPtG+e ww+++g+ d g+ppykkphdlkk+wk+ vLtavikh+sp+i++ir+ +r s+ lqdk ake+++++
Vradi05g21620.1 19 NCDPPRRRYPLDKGIAPPWWPTGQEWWWAQMGFTIDPGPPPYKKPHDLKKVWKMCVLTAVIKHISPDIAKIRNIVRHSRTLQDKLNAKETAIWS 112
5********************************************************************************************* PP
HHHTTTTT-S--XXXX.XX........XXXXXXXXXXXXXXXXXXXX.........XXXXXX.XXXXXXXXXX..................... CS
EIN3 248 svlnqeekecatvsah.ss........slrkqspkvtlsceqkedve.........gkkeskikhvqavktta..................... 302
+++++ee+ +++ +++ + s +++vt + ++ + g +
Vradi05g21620.1 113 AIVKREESFARRSYPNfFQtlppragpS-VPYDNNVTNFIRGQQSNSlggtlnllgGL--------------Nntpqhhnvangaawsflgsqn 191
***************9833233344422.22333333222222233345665555422..............0222233344456689****** PP
..........................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
EIN3 303 ..........................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
+ ++++krk ++ +++ + + c+s +++++et ++f+d+n++++++
Vradi05g21620.1 192 npststsaarillgnpppttdlitddgatsfhgvqidtaaatNDHAADKRK-AGDDVQAITFPHEAYSCNSTECPYHETGFGFSDRNARNNHQ 283
****************************************98778888888.55666666666678*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 454 aa
Download sequence Send
to blast |
MMKKKALIRA QDTVLKNMNC DPPRRRYPLD KGIAPPWWPT GQEWWWAQMG FTIDPGPPPY 60
KKPHDLKKVW KMCVLTAVIK HISPDIAKIR NIVRHSRTLQ DKLNAKETAI WSAIVKREES 120
FARRSYPNFF QTLPPRAGPS VPYDNNVTNF IRGQQSNSLG GTLNLLGGLN NTPQHHNVAN 180
GAAWSFLGSQ NNPSTSTSAA RILLGNPPPT TDLITDDGAT SFHGVQIDTA AATNDHAADK 240
RKAGDDVQAI TFPHEAYSCN STECPYHETG FGFSDRNARN NHQLTCQYRS KNPLQVVGVG 300
GLMPSDVDMP LVQSRNFAAS VTNQNQTFTV GNMGMHNMNV PCLAGQNQHL QTVQTQVYND 360
NFFDGRLCLD KDVFGNNMYV CSLESKNQQK VQNVGGTIGH SLNAEVSNVV NGNLSTSITV 420
DSPFAWDSNN SQAEFLDSPL LTTPDQDLLW PYS*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
