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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vradi05g19600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
NAC |
Protein Properties |
Length: 470aa MW: 52334.1 Da PI: 6.5125 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vradi05g19600.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 165.7 | 1.6e-51 | 11 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrFhP+deelv++yL kkv++++ l + +vd++k+ePwd+p ++ + kewyf+++rd+kyatg r+nrat+sgyWkatgkd+++l+
Vradi05g19600.1 11 LPPGFRFHPRDEELVCDYLMKKVTHNDSLL---MIDVDLNKCEPWDIPDTACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILR 101
79***********************99544...789************7666789**************************************9 PP
NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
kg+lvg++ktLvfy+grapkg+kt+Wvmhe+r+
Vradi05g19600.1 102 -KGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRI 134
.999****************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 470 aa
Download sequence Send
to blast |
MSNISMVEAK LPPGFRFHPR DEELVCDYLM KKVTHNDSLL MIDVDLNKCE PWDIPDTACV 60 GGKEWYFYTQ RDRKYATGLR TNRATASGYW KATGKDRPIL RKGTLVGMRK TLVFYQGRAP 120 KGRKTEWVMH EFRIEGPHGP PKVSSSKEDW VLCRVFYKNR EVSAKPSIGS CYEDTGSSSL 180 PALMDSYISF DQTQAHADEF EQVPCFSIFS QNQANPIFNH MTTMEPKLPA AAYGGAPNLG 240 YCLDPLSCDR KVLKAVLSQI TKMERNPLNQ NLKGSPSFGE GSSESYLSEG VSVGYKYRIQ 300 GKGRPKVCVD EASSSSSTVG SSILGTTERK EDLGDEATNV NRNNFVPQSV EEMVVETKID 360 ATNEWDGSCE PLSPVPGYDW TPHEATLKEN EVLVAQVVDA INAHKGCDQA CKKLAAKMED 420 ACKAVQQLQR EVDDLKLENQ TLTQRQTELN QEKVNLPKQK NDLVVGSKS*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-48 | 6 | 159 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-48 | 6 | 159 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-48 | 6 | 159 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-48 | 6 | 159 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-48 | 6 | 159 | 15 | 169 | NAC domain-containing protein 19 |
3swm_B | 5e-48 | 6 | 159 | 15 | 169 | NAC domain-containing protein 19 |
3swm_C | 5e-48 | 6 | 159 | 15 | 169 | NAC domain-containing protein 19 |
3swm_D | 5e-48 | 6 | 159 | 15 | 169 | NAC domain-containing protein 19 |
3swp_A | 5e-48 | 6 | 159 | 15 | 169 | NAC domain-containing protein 19 |
3swp_B | 5e-48 | 6 | 159 | 15 | 169 | NAC domain-containing protein 19 |
3swp_C | 5e-48 | 6 | 159 | 15 | 169 | NAC domain-containing protein 19 |
3swp_D | 5e-48 | 6 | 159 | 15 | 169 | NAC domain-containing protein 19 |
4dul_A | 4e-48 | 6 | 159 | 12 | 166 | NAC domain-containing protein 19 |
4dul_B | 4e-48 | 6 | 159 | 12 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by auxin. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF402602 | 0.0 | AF402602.1 Phaseolus vulgaris NAC domain protein NAC1 mRNA, complete cds. |
Publications
? help Back to Top |
- Le Hénanff G, et al.
Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance. J. Exp. Bot., 2013. 64(16): p. 4877-93 [PMID:24043850] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis. Plant Physiol., 2015. 169(2): p. 1275-91 [PMID:26304848] - Huo X,Wang C,Teng Y,Liu X
Identification of miRNAs associated with dark-induced senescence in Arabidopsis. BMC Plant Biol., 2015. 15: p. 266 [PMID:26530097] - Chen X, et al.
Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis. Plant Physiol., 2016. 170(4): p. 2136-45 [PMID:26850273] - Liu C,Wang B,Li Z,Peng Z,Zhang J
TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth. Plant Physiol., 2018. 176(1): p. 742-756 [PMID:29122985]
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