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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vradi05g18650.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
NAC |
Protein Properties |
Length: 341aa MW: 39176.2 Da PI: 4.7211 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vradi05g18650.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 169.4 | 1.2e-52 | 4 | 126 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97
FhPtdeelv +yL++k++g+++el ++i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd++v+s ++
Vradi05g18650.1 4 MFHPTDEELVAYYLERKITGRSIEL-DIIAEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATQAGYWKATGKDRPVHS-QK 95
6************************.99**************96435566888**************************************.99 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
+ vg+kktLv+y+grap+g +t+Wvmheyrl
Vradi05g18650.1 96 KPVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 126
9****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MYVMFHPTDE ELVAYYLERK ITGRSIELDI IAEVDLYKCE PWDLPDKSFL PSKDMEWYFY 60 SPRDRKYPNG SRTNRATQAG YWKATGKDRP VHSQKKPVGM KKTLVYYRGR APHGIRTNWV 120 MHEYRLIESL PGAALSSLKD SYSLCRIFKK MIQMPAKPSK EEEQQAEDAK KESMWISEEQ 180 MLGEDSSGTE FSREMETVEE KILNHEYPKF PCDASSSDLT QGTCTPTDTG IAEDFQPHFA 240 CDEANSATNS YTMGMGYPSN LFQDVEIPSF AAMHYQFPYT PLVLEDFPQI TLPETKSTKP 300 EMSDSCMLYD RHRDCMNGTL EEIISLCCTQ DNNVPFPMLE *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-52 | 5 | 150 | 23 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-52 | 5 | 150 | 23 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-52 | 5 | 150 | 23 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-52 | 5 | 150 | 23 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-52 | 5 | 150 | 26 | 168 | NAC domain-containing protein 19 |
3swm_B | 2e-52 | 5 | 150 | 26 | 168 | NAC domain-containing protein 19 |
3swm_C | 2e-52 | 5 | 150 | 26 | 168 | NAC domain-containing protein 19 |
3swm_D | 2e-52 | 5 | 150 | 26 | 168 | NAC domain-containing protein 19 |
3swp_A | 2e-52 | 5 | 150 | 26 | 168 | NAC domain-containing protein 19 |
3swp_B | 2e-52 | 5 | 150 | 26 | 168 | NAC domain-containing protein 19 |
3swp_C | 2e-52 | 5 | 150 | 26 | 168 | NAC domain-containing protein 19 |
3swp_D | 2e-52 | 5 | 150 | 26 | 168 | NAC domain-containing protein 19 |
4dul_A | 1e-52 | 5 | 150 | 23 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-52 | 5 | 150 | 23 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |