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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vradi05g11810.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
TALE |
Protein Properties |
Length: 339aa MW: 38054.1 Da PI: 6.2866 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vradi05g11810.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 27 | 7.4e-09 | 257 | 295 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp+ +e+ LA k gLt +qV++WF N R +
Vradi05g11810.1 257 MFQNflHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVR 295
5887779******************************88 PP
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2 | BELL | 56.9 | 5.2e-19 | 146 | 198 | 18 | 71 |
BELL 18 eVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71
eVd rY+q+ ++++tv+s+F+a+++l++ ++++++Al++iS ++ L+++i++
Vradi05g11810.1 146 EVDSRYSQCLDEIHTVVSAFHAATELDP-QIHAHFALQTISVLYKDLRERISNY 198
8***************************.**********************975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008285 | Biological Process | negative regulation of cell proliferation |
GO:0009640 | Biological Process | photomorphogenesis |
GO:0010073 | Biological Process | meristem maintenance |
GO:0010227 | Biological Process | floral organ abscission |
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
GO:0090470 | Biological Process | shoot organ boundary specification |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MYIAPLEISG RGDTVIDEIS QHPTSNPLIQ CYSLDLNNQS HIINGISMLS GEQGEPTSNV 60 HTDACFITPS TIADSCPLVT SRRKIIVGDA SNPMENSDFQ EHLVGGVPLT PASLAAILAD 120 RIGLEENLEN SAAALAPSIF STGALEVDSR YSQCLDEIHT VVSAFHAATE LDPQIHAHFA 180 LQTISVLYKD LRERISNYIL AMGSSFKKSC TEDSEWSIET SFLQKQWALQ QLKRKDQLWR 240 PQRGLPERSV SVLRAWMFQN FLHPYPKDAE KHLLAVKSGL TRSQVSNWFI NARVRLWKPM 300 IEEMYAEMNK RKACRNEEEI QNNHGNRISM SNQRFNVN*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |