 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi05g06820.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
ERF |
| Protein Properties |
Length: 164aa MW: 18594.8 Da PI: 4.0797 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi05g06820.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 28 | 5.7e-09 | 50 | 82 | 20 | 55 |
AP2 20 rdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
r p ++++r++lg++ t+e Aa+a++aa ++l+g
Vradi05g06820.1 50 RAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 82
444...2469***********************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 164 aa
Download sequence Send
to blast |
MSYIDYRGFA SCYLETQASV WLYQSTINSG FLLPTFTSDL ILFPTFRTIR APNQKTRIWL 60
GSYSTPEAAA RAYDAALLCL KGSSANFNFP LSSSQYIPGD AVIYDQANES MAMNEMEPWY 120
TLDDLRSPKY VDQMLSGAFF DVDSSHLLDD LYEESDIRLW NFC*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015035 | 6e-86 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
