 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi04g11240.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
LBD |
| Protein Properties |
Length: 242aa MW: 26079.1 Da PI: 5.4334 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi04g11240.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 38.1 | 4.4e-12 | 6 | 48 | 57 | 99 |
DUF260 57 amsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
+++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e +l ++
Vradi04g11240.1 6 IFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVENVLKGA 48
799********************************99988765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MVCLSIFRSL LYEACGRIVN PIYGSVGLLW SGSWQLCQAA VENVLKGAPI TPITSEAAAS 60
GRGPPLKAYD IRHVSRDENS AASNETQQQR VKTRSRVRRP VANAKPKSTT NENNGEKGTE 120
LGSSEPGLMT CEWTEEAVNR SGSHESSLSH QSEAANAVES ESMVSVETAE TSILFRDEPD 180
SNPKIVQRTD DVGLELTLGF EPVSRAQHVV PVKKRRIELK DFSGSAESGS CKMELGLECS 240
A*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
