 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi04g02990.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
TCP |
| Protein Properties |
Length: 130aa MW: 14187.2 Da PI: 6.9435 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi04g02990.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 101.6 | 1.3e-31 | 3 | 67 | 9 | 73 |
TCP 9 skihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73
++h kv+gRdRRvRlsa caar+F+L++eLG ++d++tieWLl +a+pai ++tgt+ ++ +
Vradi04g02990.1 3 RDRHIKVNGRDRRVRLSAICAARIFQLTRELGKKTDGETIEWLLHKAEPAIVAATGTGIVPSITS 67
69*******************************************************77666333 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 130 aa
Download sequence Send
to blast |
MKRDRHIKVN GRDRRVRLSA ICAARIFQLT RELGKKTDGE TIEWLLHKAE PAIVAATGTG 60
IVPSITSSVD SAATLMANTT TTLVPLDTIA AQDTNLVTIA AVARTEQPIP PFHFDFEWMQ 120
HSDLGFCDN*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 1e-164 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
