PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi04g01530.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family EIL
Protein Properties Length: 606aa    MW: 67772.4 Da    PI: 6.8735
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi04g01530.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3437.21.5e-133383691324
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel++rmwkd+++lkrlker+k  +  ++ a++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++raW
  Vradi04g01530.1  38 EELERRMWKDRIKLKRLKERQKLAI--QQ-AAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAW 128
                      8*********************877..44.489************************************************************* PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fd+ngpaai+ky+a++l++s+++++  ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww++l l++
  Vradi04g01530.1 129 WKEKVKFDKNGPAAIAKYEADCLAMSEADNS--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPH 220
                      **************************99988..78999999***************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........slrkqspk 273
                       q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++           +  ++++
  Vradi04g01530.1 221 GQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGtsgvtgmlpGVPAENKQ 313
                      **9.9**********************************************************************4445688777645558888 PP

                      XXXXXXXXXXXXXXXXXX.XXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXX. CS
             EIN3 274 vtlsceqkedvegkkeskikhvqavktta.....gfpvvrkrkkkpsesakvsske 324
                         s+ +++dv+g+++   + +++++++      + pv+++r +kp++++  s+++
  Vradi04g01530.1 314 AATSSASNYDVDGTDDGIGSVSSKEDRRIqivetEPPVNSRRVRKPVQDRDQSKQR 369
                      8999999*****55555544333333332455557778888888877777666653 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.6E-12738285No hitNo description
Gene3DG3DSA:1.10.3180.101.3E-71160293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.89E-62166289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    Send to blast
MAEMEEIGPD VCSDLEVDDI RCPNIAEKDV SDEEIEAEEL ERRMWKDRIK LKRLKERQKL  60
AIQQAAEKQK PRQSSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
SSDNIRAWWK EKVKFDKNGP AAIAKYEADC LAMSEADNSR NGNSQSILQD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE DWWSQLNLPH GQSPPYKKPH DLKKMWKVGV  240
LTAVIKHMSP NIAKIRRHVR QSKCLQDKMT AKESAIWLGV LSREEALIRQ PSSDNGTSGV  300
TGMLPGVPAE NKQAATSSAS NYDVDGTDDG IGSVSSKEDR RIQIVETEPP VNSRRVRKPV  360
QDRDQSKQRP RKIRVTSRTV DKPPAQSDNE VLHVEPRSKG LNINQTGAEV VRIQIHGNEQ  420
SNETDSAARP LEKELEVPAQ LPAPEFDHYS YLHTNNLIST ESIYTSGRPI HYPELQNPDM  480
QHEPTYNLYN PAAGYDPGHK QQLHPGNNSE GRPEIDAVHV QAVHMKGDEI TGGDLQYFGK  540
DAFQNELDRP IDHPFFGSPL SSMSLDFGGL NSPFHLDDFL GITKIPVPVA YLGKASQIGI  600
SVYGV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-731652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi04g01530.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014498119.10.0ETHYLENE INSENSITIVE 3-like 3 protein isoform X2
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1S3TWH00.0A0A1S3TWH0_VIGRR; ETHYLENE INSENSITIVE 3-like 3 protein isoform X2
STRINGXP_007150399.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]