 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi0134s00540.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
TCP |
| Protein Properties |
Length: 126aa MW: 13547.5 Da PI: 6.7924 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi0134s00540.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 79.6 | 8.3e-25 | 1 | 50 | 24 | 73 |
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73
+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++
Vradi0134s00540.1 1 MPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFS 50
9*****************************************99999666 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 126 aa
Download sequence Send
to blast |
MPIICAARVF QLTRELGHKS DGQTIEWLLR QAEPSIIAAT GTGTTPATFS TVSDHKPLLP 60
PPTPFILGKR IRPDDTDAVS KDEAVSLVAP PTPPALWALP PRPDFSQFLR GEVHELRNSI 120
GLGFS*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 1e-160 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
