PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24	9.1e-08	828	870	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WTt Edel + +++G++ W++Iar + +R++ q+ +r+ ++ Vocar.0012s0182.1.p 828 WTTAEDELMMYGMTRYGTN-WRLIARNLLITRSASQIGNRYKNL 870 ***************99.*****99********997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.249	820	875	IPR017930	Myb domain
SuperFamily	SSF46689	2.99E-8	820	871	IPR009057	Homeodomain-like
SMART	SM00717	7.5E-6	824	873	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	2.0E-9	826	878	IPR009057	Homeodomain-like
Pfam	PF13921	2.2E-6	828	877	No hit	No description
PROSITE profile	PS50090	5.715	3543	3598	IPR017877	Myb-like domain
SMART	SM00717	17	3547	3600	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 3709 aa Download sequence Send to blast
MEHQELEPLA TSLLPLDVDG DDDDDEYQVD SDSETDDTES DEGYEQEALP QEEDTLHLLD 60 IADDLLGSLE EEVLSDSECV ESDAEDEDEE AGADAAPANL QKCQQPAAEG MGEHAVDSTP 120 KLGRLARGAA GRRAEQTVVH DAGGARDAAD DGGCSGATLL HGTAQKPRRG AQVSSTQQGL 180 QQHVQHGVSS VGDVPAWEAL GAAVASTPVR HPRQQTNCGG PQLLAGCPAG IFTPLPPHPG 240 GPQQQQLQQH NNSNNGHEAP YCYHNGSVPG DQQQEDLPSH QQLGPLNGQA SLEGNTHGPA 300 GTSVHVNHHQ QDHQDRMPPG PGHGQAAAQE RSQPVELCPP SGGICRRTRA HMSLRDVDLA 360 ELEQQLPQHV DLEEIELAED DEEYGKFLQA LFNDTASLPE DSSDEDPDFA ADLDLDPDGA 420 SKDEDDDRAW LKLLKSPDRE DGGSAGGPGG PTTLDSPARR TRAKSRRGNA KGGEAAAATS 480 DIGEPMSLPE MTAEQLSILH AQVHCHTQML VQTYALFFGD ADSEAQDLAA KAEAMLEQLM 540 FCRDTQITTR KALGLASYTP EDLLRPPPQP PPPDGPAPVA STGLVFSGGA FADRTTVSVT 600 AEGGSSSGPA AAAAAAAATD SSGGGGGGRS CGQTSQVLLL QQQQKLPVGV VPSAAAGAPV 660 TTAAAVAATS LLGHSEISQD EVSAAAASYE WDNDCGAGSA GAGVMNAQKA AAAAKTAALS 720 TAILTFRPAW CPGPDGGVWS VLDVVPLRRF PQVQDILHVL PAMQYSALQQ QRELQVIAKS 780 KRKSRRRRMD DPLSVVLEWA RPALNCLQGH LVTALMYNPS PPVPLSYWTT AEDELMMYGM 840 TRYGTNWRLI ARNLLITRSA SQIGNRYKNL NARRHKPEEM LEEGRADALQ ARAVGLVCAP 900 VPAAAAAAAA AAAARKSKTT APTAHPKVPN APALGSDAVA AVVAGVGGGQ MAGTAVPAAP 960 KPTLQPAAAT LPATGLSGAG ANTAAAAAAA VAAALGAPPI TTAPPMAPEL AAMVQAARIV 1020 GLPPAVAAAH IMQAHQRLRP QNPAPARKPL PQPAPPQVPL AVALQLMSQL QKPGGVTGPA 1080 AAAARLLAAQ LQQPSTAPAA IAALQLAAQQ AASPSGLAVG APATGVTASA AGIAAAATNG 1140 DLGGLGGLLS GQSGTVGAGG DGNGGWDTGM PSLLAMAAQL LQASRAANQA TALGALVPQQ 1200 QPFPGHLSRG RAAACFALTS SHVIHSPSPR HPRSVLTDIG DVLGISRLRM AKKAIPRTLS 1260 NGEMAAEGNA RDDAVACSLF PSSPACAQVP LTAPQLVPLA AASGGVTLPV PLAAQAVVAP 1320 QNLSLLLTLG QASTTQLVTA ATSVLGTSTA TANPAATGPP SVPQPVAADG RPSGMATAAD 1380 GVVVVGGGSD AGMYGVRHQE ATVMFAGVPP AGGSEVRPAP MNVPTCWPEH QHDGEPDEAM 1440 NWTPPSPQSP PGPTVQGNSG DCTAALLPAG QTGMARPPPP AAAAPRLGGA ADLGVRVPEG 1500 VPPGAAMPAP WPQAVYSGLA GDPLSRYTMT VAGGAPAASV GAAGSAAADD AAHGCGPTDP 1560 RLPAVPRDLG IHPPLDFTTP QIPPPSRHTE EHQLPNLQRN PQHPGSQQDQ DQHQRSEASP 1620 RTHALNPASL HRDHHHRHHD AVPHTHQQHQ HQHQQHQQHH ELPSLSENFT IGGISELLSY 1680 GGPKSGAATP ATCVSPPGGF QSACFSRGHT VSLLLGSGLG VSALLQGDAE GDSTPTRSAV 1740 AGPQRPVTSD GGNGGNLRSH DQYRHLNNHN HDYSKHKYHS HMQQGSGGGG QVARGMPEEP 1800 RTKTTGDVDA DGVVNAGAGA GEHDVEDRGL GTPREDFLPS RCRQQDGTAG AVPPQPQPQL 1860 RLPPPPPPKQ QQQQVPFSPS SPVSPFVAGG PPVPIRVWGH GGPAAAMPPP VQRLAALRGG 1920 VDVTPSSDPK AKRRSRICAA FFAAEDAARR DAVATLDTAP SPFEGTAQND HREGRGARAG 1980 AATAGYRPRP PLFADEGGGS GGDAGQRRGG EGQGLHEVST ATGEDDDEAD AAAEGLARAR 2040 KRLRLDLEEG GRCGGKTPGR AQRTRRLGLE EGGVAAASGE MRGAWGSAAN SVAASPVKPT 2100 SSPGTRAAAA TAAAAAAALV ARGFAAQPPD CGSRQPEQQQ QQQHSIGTGS SGGSKRRSGG 2160 TATTSGASTK RVRPGQTSGC TGSSGAATDA DAATLIEDTV VEAPTTVAPV AAAAVDDVGS 2220 SRDGGQRQGQ GPGLGPGPVQ PASRLSGLKR SRSGAGSKPP PADKDTRDSK DRARQAGPYI 2280 THGEPLAVVD SNANASTNTN SPIVTASEDG VLNVLSTAPW DGSCAAAGVS SGPTKPPQLQ 2340 CQLSAAVPPS GPGGHVAGKA AMAGTATEAA AAGPRSSMVP VAAAKPPKAP ARRGTAGAQR 2400 LTRASAAAAA AAAAAAAGSC PAPAPSVRKP HSAALNGTIA HATAAATSSP PPVRALPDAH 2460 AATAAATDGA VHQLAAVAPL TSSPQPPVPM LTTPSSAHAV SEVSCGGLSL HSLLFGGDSL 2520 DLATLLPCIS SRSLAAAANV CSPTSRPTAL FQPAAGAGMV SSQHPSPAAV AAAVAANALA 2580 ASGSAAVAAA PPPAGFTSPP HSQLLQLTPF APSVCTLGSL GFLPLFSAST DPWQALQVAS 2640 ACGTTSRGPA MRVVAGSTAA GDGDGRGEVP NGPLAASASA LAADGTPMDP WSRFMAACSP 2700 AAANSNAATA AAPLPLPSYL SADYSLTAFH LHMFPPGSAG LRDKDADATP AAPPPVTTAA 2760 RTTAEVEPER SREPGRELTS CRGDTAAAGA ADAAAEAHIR DGHDMDDGPP SVETGAAVAM 2820 EEVHISGGGG KDSPPVQLDA TGSPPPPPSS EALAAGAAAA VGSIAAKTAA VLAGTRHAEP 2880 AVLELEATEP LAPPPPPPLP PSPPVDVGTA ARPLASGRVF CPATAEVEVR QLPLDSEAAA 2940 GVLMSPPPAS CGHLPQEHDQ RQQQQQQDAA CARYSTAGKH AGGEVATACG GLLPPPLPPP 3000 FPRHSNVPSP LGQSPLPDSR ALPSETVRLF GHTVAKPLPI ASPTMPAAPK LLRSAALATA 3060 AAAAPPGIAA AIAALQPLQL PAYPDRKARP PPVPHGDDVT AATAAVATAA AYTVDDSSNS 3120 RSQSQPSEIA AVQQLAAVPP LPLALQTPAH GQARAGGSLF RNVLSPADTP RCATPGTGFD 3180 MPRLADATAA AAATPMPTPM QPSPGADVAA AAAAAAQYTP AIVAPAGAFA IPDMHTAVAV 3240 AAPLSLTPLP PALVATAAKT VGRGDMWQAR RHVVGAPTGT LGPSISHWAS NDHDPGHPDF 3300 SAPGVEVDRQ GSSCLRGGAA VPYWRGVQTA GGAAAGGGGS GAAADTPGHV TCFSKVARRV 3360 PVAAVDPLML PSPSVLQPTP QGRLRPVDDG EEVVPLRAAE AEQSPFREDE DDDGDDERNR 3420 REGDGDGRGN DGGRKYGSAA AEDDDHEVDR AGDAEEADDE GASEGEDCGL PESPSPRPES 3480 PGGHVSVIAA VKPSGAAATA AAAAAVATGG VVKNGEGKSA AQPKEQVQAR QPPAPPKPAA 3540 AAAPAAAGPS WTKEQDQLVM REIFRLGEGA STWRCISALL GGPPWTMEAV EARGKVLMER 3600 MMQMMDSKGE DPCTPYIFYF VLHVTRNRFT WWKDYSGEFV LGRRSSAASV QHIMTDVLLA 3660 HHERDGNDDD DDDDDEEEEE EEEEGEEMCK LRHHSCGCVA SADIASVN*

Sequence ? help Back to Top

Protein Sequence Length: 3709 aa Download sequence Send to blast

MEHQELEPLA TSLLPLDVDG DDDDDEYQVD SDSETDDTES DEGYEQEALP QEEDTLHLLD  60
IADDLLGSLE EEVLSDSECV ESDAEDEDEE AGADAAPANL QKCQQPAAEG MGEHAVDSTP  120
KLGRLARGAA GRRAEQTVVH DAGGARDAAD DGGCSGATLL HGTAQKPRRG AQVSSTQQGL  180
QQHVQHGVSS VGDVPAWEAL GAAVASTPVR HPRQQTNCGG PQLLAGCPAG IFTPLPPHPG  240
GPQQQQLQQH NNSNNGHEAP YCYHNGSVPG DQQQEDLPSH QQLGPLNGQA SLEGNTHGPA  300
GTSVHVNHHQ QDHQDRMPPG PGHGQAAAQE RSQPVELCPP SGGICRRTRA HMSLRDVDLA  360
ELEQQLPQHV DLEEIELAED DEEYGKFLQA LFNDTASLPE DSSDEDPDFA ADLDLDPDGA  420
SKDEDDDRAW LKLLKSPDRE DGGSAGGPGG PTTLDSPARR TRAKSRRGNA KGGEAAAATS  480
DIGEPMSLPE MTAEQLSILH AQVHCHTQML VQTYALFFGD ADSEAQDLAA KAEAMLEQLM  540
FCRDTQITTR KALGLASYTP EDLLRPPPQP PPPDGPAPVA STGLVFSGGA FADRTTVSVT  600
AEGGSSSGPA AAAAAAAATD SSGGGGGGRS CGQTSQVLLL QQQQKLPVGV VPSAAAGAPV  660
TTAAAVAATS LLGHSEISQD EVSAAAASYE WDNDCGAGSA GAGVMNAQKA AAAAKTAALS  720
TAILTFRPAW CPGPDGGVWS VLDVVPLRRF PQVQDILHVL PAMQYSALQQ QRELQVIAKS  780
KRKSRRRRMD DPLSVVLEWA RPALNCLQGH LVTALMYNPS PPVPLSYWTT AEDELMMYGM  840
TRYGTNWRLI ARNLLITRSA SQIGNRYKNL NARRHKPEEM LEEGRADALQ ARAVGLVCAP  900
VPAAAAAAAA AAAARKSKTT APTAHPKVPN APALGSDAVA AVVAGVGGGQ MAGTAVPAAP  960
KPTLQPAAAT LPATGLSGAG ANTAAAAAAA VAAALGAPPI TTAPPMAPEL AAMVQAARIV  1020
GLPPAVAAAH IMQAHQRLRP QNPAPARKPL PQPAPPQVPL AVALQLMSQL QKPGGVTGPA  1080
AAAARLLAAQ LQQPSTAPAA IAALQLAAQQ AASPSGLAVG APATGVTASA AGIAAAATNG  1140
DLGGLGGLLS GQSGTVGAGG DGNGGWDTGM PSLLAMAAQL LQASRAANQA TALGALVPQQ  1200
QPFPGHLSRG RAAACFALTS SHVIHSPSPR HPRSVLTDIG DVLGISRLRM AKKAIPRTLS  1260
NGEMAAEGNA RDDAVACSLF PSSPACAQVP LTAPQLVPLA AASGGVTLPV PLAAQAVVAP  1320
QNLSLLLTLG QASTTQLVTA ATSVLGTSTA TANPAATGPP SVPQPVAADG RPSGMATAAD  1380
GVVVVGGGSD AGMYGVRHQE ATVMFAGVPP AGGSEVRPAP MNVPTCWPEH QHDGEPDEAM  1440
NWTPPSPQSP PGPTVQGNSG DCTAALLPAG QTGMARPPPP AAAAPRLGGA ADLGVRVPEG  1500
VPPGAAMPAP WPQAVYSGLA GDPLSRYTMT VAGGAPAASV GAAGSAAADD AAHGCGPTDP  1560
RLPAVPRDLG IHPPLDFTTP QIPPPSRHTE EHQLPNLQRN PQHPGSQQDQ DQHQRSEASP  1620
RTHALNPASL HRDHHHRHHD AVPHTHQQHQ HQHQQHQQHH ELPSLSENFT IGGISELLSY  1680
GGPKSGAATP ATCVSPPGGF QSACFSRGHT VSLLLGSGLG VSALLQGDAE GDSTPTRSAV  1740
AGPQRPVTSD GGNGGNLRSH DQYRHLNNHN HDYSKHKYHS HMQQGSGGGG QVARGMPEEP  1800
RTKTTGDVDA DGVVNAGAGA GEHDVEDRGL GTPREDFLPS RCRQQDGTAG AVPPQPQPQL  1860
RLPPPPPPKQ QQQQVPFSPS SPVSPFVAGG PPVPIRVWGH GGPAAAMPPP VQRLAALRGG  1920
VDVTPSSDPK AKRRSRICAA FFAAEDAARR DAVATLDTAP SPFEGTAQND HREGRGARAG  1980
AATAGYRPRP PLFADEGGGS GGDAGQRRGG EGQGLHEVST ATGEDDDEAD AAAEGLARAR  2040
KRLRLDLEEG GRCGGKTPGR AQRTRRLGLE EGGVAAASGE MRGAWGSAAN SVAASPVKPT  2100
SSPGTRAAAA TAAAAAAALV ARGFAAQPPD CGSRQPEQQQ QQQHSIGTGS SGGSKRRSGG  2160
TATTSGASTK RVRPGQTSGC TGSSGAATDA DAATLIEDTV VEAPTTVAPV AAAAVDDVGS  2220
SRDGGQRQGQ GPGLGPGPVQ PASRLSGLKR SRSGAGSKPP PADKDTRDSK DRARQAGPYI  2280
THGEPLAVVD SNANASTNTN SPIVTASEDG VLNVLSTAPW DGSCAAAGVS SGPTKPPQLQ  2340
CQLSAAVPPS GPGGHVAGKA AMAGTATEAA AAGPRSSMVP VAAAKPPKAP ARRGTAGAQR  2400
LTRASAAAAA AAAAAAAGSC PAPAPSVRKP HSAALNGTIA HATAAATSSP PPVRALPDAH  2460
AATAAATDGA VHQLAAVAPL TSSPQPPVPM LTTPSSAHAV SEVSCGGLSL HSLLFGGDSL  2520
DLATLLPCIS SRSLAAAANV CSPTSRPTAL FQPAAGAGMV SSQHPSPAAV AAAVAANALA  2580
ASGSAAVAAA PPPAGFTSPP HSQLLQLTPF APSVCTLGSL GFLPLFSAST DPWQALQVAS  2640
ACGTTSRGPA MRVVAGSTAA GDGDGRGEVP NGPLAASASA LAADGTPMDP WSRFMAACSP  2700
AAANSNAATA AAPLPLPSYL SADYSLTAFH LHMFPPGSAG LRDKDADATP AAPPPVTTAA  2760
RTTAEVEPER SREPGRELTS CRGDTAAAGA ADAAAEAHIR DGHDMDDGPP SVETGAAVAM  2820
EEVHISGGGG KDSPPVQLDA TGSPPPPPSS EALAAGAAAA VGSIAAKTAA VLAGTRHAEP  2880
AVLELEATEP LAPPPPPPLP PSPPVDVGTA ARPLASGRVF CPATAEVEVR QLPLDSEAAA  2940
GVLMSPPPAS CGHLPQEHDQ RQQQQQQDAA CARYSTAGKH AGGEVATACG GLLPPPLPPP  3000
FPRHSNVPSP LGQSPLPDSR ALPSETVRLF GHTVAKPLPI ASPTMPAAPK LLRSAALATA  3060
AAAAPPGIAA AIAALQPLQL PAYPDRKARP PPVPHGDDVT AATAAVATAA AYTVDDSSNS  3120
RSQSQPSEIA AVQQLAAVPP LPLALQTPAH GQARAGGSLF RNVLSPADTP RCATPGTGFD  3180
MPRLADATAA AAATPMPTPM QPSPGADVAA AAAAAAQYTP AIVAPAGAFA IPDMHTAVAV  3240
AAPLSLTPLP PALVATAAKT VGRGDMWQAR RHVVGAPTGT LGPSISHWAS NDHDPGHPDF  3300
SAPGVEVDRQ GSSCLRGGAA VPYWRGVQTA GGAAAGGGGS GAAADTPGHV TCFSKVARRV  3360
PVAAVDPLML PSPSVLQPTP QGRLRPVDDG EEVVPLRAAE AEQSPFREDE DDDGDDERNR  3420
REGDGDGRGN DGGRKYGSAA AEDDDHEVDR AGDAEEADDE GASEGEDCGL PESPSPRPES  3480
PGGHVSVIAA VKPSGAAATA AAAAAVATGG VVKNGEGKSA AQPKEQVQAR QPPAPPKPAA  3540
AAAPAAAGPS WTKEQDQLVM REIFRLGEGA STWRCISALL GGPPWTMEAV EARGKVLMER  3600
MMQMMDSKGE DPCTPYIFYF VLHVTRNRFT WWKDYSGEFV LGRRSSAASV QHIMTDVLLA  3660
HHERDGNDDD DDDDDEEEEE EEEEGEEMCK LRHHSCGCVA SADIASVN*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002952708.1	0.0	hypothetical protein VOLCADRAFT_93366
TrEMBL	D8U1X8	0.0	D8U1X8_VOLCA; Uncharacterized protein
STRING	XP_002952708.1	0.0	(Volvox carteri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP10189	2	2

Link Out ? help Back to Top
Phytozome	Vocar.0012s0182.1.p