PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

ERF

Protein Properties

Length: 56aa MW: 6137.07 Da PI: 10.6122

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang11g10290.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22	4.1e-07	2	25	32	55
AP2 32 slgkfgtaeeAakaaiaarkkleg 55 +lg+f+tae A +a+++a ++++g Vang11g10290.1 2 WLGTFDTAEAAVRAYDEATLRFKG 25 9*****************999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF54171	2.62E-10	1	35	IPR016177	DNA-binding domain
CDD	cd00018	8.32E-14	1	35	No hit	No description
Gene3D	G3DSA:3.30.730.10	4.3E-15	1	34	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	13.182	1	33	IPR001471	AP2/ERF domain
SMART	SM00380	0.0013	1	39	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 56 aa Download sequence Send to blast
MWLGTFDTAE AAVRAYDEAT LRFKGNKAKL NFPENVIVVR PPPSRFSGNL TLGLR*

Functional Description ? help Back to Top
Source	Description
UniProt	Negative regulator of the abscisic acid (ABA) signaling pathway involved in seed germination and in responses to stress conditions. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269\|PubMed:16227468}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang11g10290.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By abscisic acid (ABA) and stresses, including cold, drought and salt (PubMed:16227468, PubMed:26961720). Triggered by YY1 (PubMed:26961720). {ECO:0000269\|PubMed:16227468, ECO:0000269\|PubMed:26961720}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015041	3e-60	AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013616576.1	1e-16	PREDICTED: ethylene-responsive transcription factor ABR1-like
Refseq	XP_017417472.1	8e-17	PREDICTED: ethylene-responsive transcription factor ERF110-like
Swissprot	Q9FGF8	2e-16	ABR1_ARATH; Ethylene-responsive transcription factor ABR1
TrEMBL	A0A078IAC0	2e-15	A0A078IAC0_BRANA; BnaC02g43290D protein
TrEMBL	A0A0D3AYQ8	2e-15	A0A0D3AYQ8_BRAOL; Uncharacterized protein
TrEMBL	A0A1J3DV09	2e-15	A0A1J3DV09_NOCCA; Ethylene-responsive transcription factor ABR1 (Fragment)
STRING	Bo2g166380.1	4e-16	(Brassica oleracea)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4919	32	53

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64750.1	8e-19	ERF family protein

Publications ? help Back to Top
Choi DS,Hwang BK Proteomics and functional analyses of pepper abscisic acid-responsive 1 (ABR1), which is involved in cell death and defense signaling. Plant Cell, 2011. 23(2): p. 823-42 [PMID:21335377] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Li T,Wu XY,Li H,Song JH,Liu JY A Dual-Function Transcription Factor, AtYY1, Is a Novel Negative Regulator of the Arabidopsis ABA Response Network. Mol Plant, 2016. 9(5): p. 650-661 [PMID:26961720] Sanyal SK, et al. Arabidopsis CBL interacting protein kinase 3 interacts with ABR1, an APETALA2 domain transcription factor, to regulate ABA responses. Plant Sci., 2017. 254: p. 48-59 [PMID:27964784] Choi SW,Lee SB,Na YJ,Jeung SG,Kim SY Arabidopsis MAP3K16 and Other Salt-Inducible MAP3Ks Regulate ABA Response Redundantly. Mol. Cells, 2017. 40(3): p. 230-242 [PMID:28292003]