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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang11g05690.1 |
Common Name | LR48_Vigan01g208700 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
GATA |
Protein Properties |
Length: 487aa MW: 54142.8 Da PI: 6.2475 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang11g05690.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 50.1 | 3.8e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+
Vang11g05690.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
****************88888***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 487 aa
Download sequence Send
to blast |
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAENADYEDQ 60 KVSRVKSISL NKNKEVKLVK RKQNYDNAAS GGFVPDYNQG HLKVVDEDTS NRSSSGSAIS 120 NSESCAQFGG TDASDLTGPA MSVVWDAMVP SKKRTCSGRP KPSSVEKLTR DLCTILHEQQ 180 SCFSASSEED LLLESDTPMV SVEIGHGSIL IRHPSSIARD EESEASSLSV DNKQCLMNEA 240 YSFSSTIPLY SSDHSGMNFS SQGIEKIENS AGQIMQQEKL ERHVFLSSLQ SFIILDVVNY 300 EEFMRNLTNE EQQQLLKYLP VVDTSNFIDS LKNMFSSFQF KENLTYFQQL LGEGVFDISL 360 LGTKPEEWKT LKRLVLSNMS KSKWVEHYNF LKKCENKAGK TNGPGSTAME SSNITNAKRI 420 REHDSQNQNF AELKTTMRSP IRVIINPVCE GKEVVEEGSS FSPESLFSLP HGVGGLHMLD 480 SFNYVGE
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |