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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang11g05230.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
NAC |
Protein Properties |
Length: 375aa MW: 42254 Da PI: 5.0201 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang11g05230.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167.6 | 4.1e-52 | 37 | 167 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeelv +yLk+kveg ++el evi+ ++ yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v+
Vang11g05230.1 37 LPPGFRFHPTDEELVGYYLKRKVEGLEIEL-EVIPVINFYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVV 130
79****************************.99**************95344555788************************************* PP
NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ ++++g +ktLvfy grap g +tdWvmheyrl
Vang11g05230.1 131 CQsdPSNVTGYRKTLVFYAGRAPLGDRTDWVMHEYRL 167
98766778***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008283 | Biological Process | cell proliferation |
GO:0071365 | Biological Process | cellular response to auxin stimulus |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
LETTCFLISC YIALVTFSSS ASQFFVTLSF NMGGATLPPG FRFHPTDEEL VGYYLKRKVE 60 GLEIELEVIP VINFYKFDPW ELPEKSFLPK RDMEWFFFCP RDRKYPNGSR TNRATKAGYW 120 KATGKDRKVV CQSDPSNVTG YRKTLVFYAG RAPLGDRTDW VMHEYRLCDD LGQPTPSFQG 180 GFALCRVIKK NEKASATKGE NKGKRAASSS INGSDTSVRF SGEPFSNSGD SSSHASQLNN 240 ESRYSSPITS PYNVAPMREI NQASLETDPS NFWISPDMIL DSSKDYPQLQ HAVSEYFPRY 300 DLPCMGTQWQ SVEHSETPSS FSYSNVNGEV EFADTLSQIG GMSPYSREWN SMDFYGNGDV 360 PYEDYDQINS ISYP*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-49 | 36 | 194 | 16 | 169 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-49 | 36 | 194 | 16 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-49 | 36 | 194 | 16 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-49 | 36 | 194 | 16 | 169 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-49 | 36 | 195 | 19 | 173 | NAC domain-containing protein 19 |
3swm_B | 6e-49 | 36 | 195 | 19 | 173 | NAC domain-containing protein 19 |
3swm_C | 6e-49 | 36 | 195 | 19 | 173 | NAC domain-containing protein 19 |
3swm_D | 6e-49 | 36 | 195 | 19 | 173 | NAC domain-containing protein 19 |
3swp_A | 6e-49 | 36 | 195 | 19 | 173 | NAC domain-containing protein 19 |
3swp_B | 6e-49 | 36 | 195 | 19 | 173 | NAC domain-containing protein 19 |
3swp_C | 6e-49 | 36 | 195 | 19 | 173 | NAC domain-containing protein 19 |
3swp_D | 6e-49 | 36 | 195 | 19 | 173 | NAC domain-containing protein 19 |
4dul_A | 5e-49 | 36 | 194 | 16 | 169 | NAC domain-containing protein 19 |
4dul_B | 5e-49 | 36 | 194 | 16 | 169 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in tissue reunion of wounded inflorescence stems. Required for the division of pith cells in the reunion process, which is dependent on polar-transported auxin and the wound-inducible hormones ethylene and jasmonate (PubMed:21911380). Binds to the promoters of XTH19 and XTH20 to induce their expression via auxin signaling. XTH19 and XTH20 are involved in cell proliferation in the tissue reunion process of incised stems (PubMed:25182467). Involved in hypocotyl graft union formation. Required for the auxin- mediated promotion of vascular tissue proliferation during hypocotyl graft attachment (PubMed:27986917). {ECO:0000269|PubMed:21911380, ECO:0000269|PubMed:25182467, ECO:0000269|PubMed:27986917}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding in the flowering stem. {ECO:0000269|PubMed:21911380}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-177 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |