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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vang11g03810.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
B3 |
| Protein Properties |
Length: 454aa MW: 51538.6 Da PI: 6.8366 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang11g03810.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 60.6 | 2.7e-19 | 89 | 179 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
f+k l++s+v + ++ lp +f+++h + +++t++ledesg++++ k+i +k++ l++GW++F ++L+egD vvF+l++ ++f +v
Vang11g03810.1 89 FVKSLVRSHVASCFWMGLPVSFCKRHLPD--KDTTIILEDESGKEYNTKFIACKTG----LSAGWRQFSAVHKLQEGDAVVFQLVEPTKF--KVY 175
89************************534..5679***************777776....***********************9876666..999 PP
EE-S CS
B3 96 vfrk 99
++r+
Vang11g03810.1 176 IIRA 179
9886 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 454 aa
Download sequence Send
to blast |
LKMVVTDERN RDRANRRDVV ELTQYDQAVT VAYYGEELHG GATCAEAQKF SSSMKAAVEG 60
TSSRGEVMSS AVLQAEEVQS NLRPEFPSFV KSLVRSHVAS CFWMGLPVSF CKRHLPDKDT 120
TIILEDESGK EYNTKFIACK TGLSAGWRQF SAVHKLQEGD AVVFQLVEPT KFKVYIIRAN 180
NTRELDGAFL NFDSCTKQQK MGGKTCKDNM DTDLTCNSSK RKHGKSVPLD IQKKKKANLS 240
RLRPKVMPSV EQPEDGSEEA LSEVMEEFRM LEFEDVRGFE NFSIIVDGVS IDAEFPDDVR 300
NKYYRLCCSQ HAFLHENLIK GMNYKLVAGI ISETVNIADA IKVSMLCTPR FEFVNWDKTL 360
LAFEHLGMNV EFLRIRLRRL VSIAYEENDV SEVKKYLASR NEYSRADDEI RNIEEKLEEL 420
KGACNGFGAY IGSLKGKAEN YHNKFRREVH APW*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 219 | 235 | KRKHGKSVPLDIQKKKK |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
