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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Vang11g03070.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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| Family |
bZIP |
| Protein Properties |
Length: 351aa MW: 37233.2 Da PI: 5.8028 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang11g03070.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 68.3 | 1.3e-21 | 274 | 330 | 7 | 63 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++rkq+NRe+ArrsR+RK+ae+e L+++v++L +eN++L++el++l++e++kl+se+
Vang11g03070.1 274 QKRKQSNRESARRSRLRKQAECEDLQKRVETLGSENRKLREELQRLSEECEKLTSEN 330
79*****************************************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010310 | Biological Process | regulation of hydrogen peroxide metabolic process |
| GO:0010629 | Biological Process | negative regulation of gene expression |
| GO:0090342 | Biological Process | regulation of cell aging |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
LIIGPFLFLW LRGTDSKLFY MGAGEESTTK PSKSSSSVQE TPTVPAYPDW SSSMQAYYSP 60
GATPPPFFAS TVASPTPHPF LWGSQHPLMP PYGTPVPYPA LYPPGSIYPH PSMAVTPSVI 120
QQSTEIEGKG ADGKDRDSSK KLKGTSANTG SKAGESGKAG SGSGNDGMSQ SGESGSEGSS 180
NACDENTNQQ ESATNKKGSF DLMLVDGANA QNNSAGAISQ SSVPGKPVVS MPATNLNIGM 240
DLWNPSSGGA EAAKMRHNQS GAPGVVALGE QWIQKRKQSN RESARRSRLR KQAECEDLQK 300
RVETLGSENR KLREELQRLS EECEKLTSEN NSIKEELERM CGPEAVADLG *
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 284 | 290 | RRSRLRK |
| 2 | 284 | 291 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter (PubMed:1373374). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional activator in light-regulated expression of LHCB2.4. Probably binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:1373374, ECO:0000269|PubMed:22718771}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | PVU57389 | 0.0 | U57389.1 Phaseolus vulgaris bZIP transcriptional repressor ROM1 mRNA, complete cds. |
| Publications
? help Back to Top |
- Gangappa SN,Srivastava AK,Maurya JP,Ram H,Chattopadhyay S
Z-box binding transcription factors (ZBFs): a new class of transcription factors in Arabidopsis seedling development.
Mol Plant, 2013. 6(6): p. 1758-68
[PMID:24157607] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Karumuri S,Bandopadhyay R
In silico analysis of the structure and interaction of COP1 protein of Arabidopsis thaliana.
Indian J. Biochem. Biophys., 2014. 51(5): p. 343-9
[PMID:25630103] - Smykowski A,Zimmermann P,Zentgraf U
CORRECTION. G-Box Binding Factor1 Reduces CATALASE2 Expression and Regulates the Onset of Leaf Senescence in Arabidopsis.
Plant Physiol., 2016. 170(2): p. 1164-7
[PMID:26826725] - Smykowski A,Fischer SM,Zentgraf U
Phosphorylation Affects DNA-Binding of the Senescence-Regulating bZIP Transcription Factor GBF1.
Plants (Basel), 2015. 4(3): p. 691-709
[PMID:27135347] - Giri MK, et al.
GBF1 differentially regulates CAT2 and PAD4 transcription to promote pathogen defense in Arabidopsis thaliana.
Plant J., 2017. 91(5): p. 802-815
[PMID:28622438]
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