 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vang11g03040.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 201aa MW: 23858.2 Da PI: 7.5675 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang11g03040.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.2 | 2.8e-18 | 48 | 101 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq+ Le+ F +++++ e++ +LA +lg++ rqV vWFqNrR ++k
Vang11g03040.1 48 KKRKLTAEQVSLLEKNFCSEQKLESERKDQLAFELGMDPRQVAVWFQNRRFRWK 101
45699************************************************9 PP
|
| 2 | HD-ZIP_I/II | 109.5 | 2.3e-35 | 48 | 138 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kkr+l++eqv+lLE++F +e+kLe+erK +la eLg++prqvavWFqnrR R+ktk+lE++y+ Lk+ +++ + ++++Le+ v +L+e+l
Vang11g03040.1 48 KKRKLTAEQVSLLEKNFCSEQKLESERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNVHETTMLQKCHLETRVLKLEEQLL 138
9**************************************************************************************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MNNRLESQMM LFSHQYPGAF TEVTPPQQGK EAKPRRKRNK NGAAATPKKR KLTAEQVSLL 60
EKNFCSEQKL ESERKDQLAF ELGMDPRQVA VWFQNRRFRW KTKKLEEEYS NLKNVHETTM 120
LQKCHLETRV LKLEEQLLEA KKEIQQLQER DERAASKDLL EAVNPPFPEE FRVEEYDYGD 180
VFYIPETHYI NGMEWINLYM *
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 35 | 50 | RKRNKNGAAATPKKRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 1e-171 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
