 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang09g06330.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
GRF |
| Protein Properties |
Length: 300aa MW: 33896.3 Da PI: 7.8596 |
| Description |
GRF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang09g06330.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRC | 78.3 | 7.6e-25 | 28 | 71 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e
Vang09g06330.1 28 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 71
79***************************************987 PP
|
| 2 | QLQ | 31.4 | 5.9e-12 | 8 | 25 | 2 | 19 |
QLQ 2 aFTaaQlqlLksQilAyK 19
+FT++Q+q+L++Q+l+yK
Vang09g06330.1 8 PFTPSQWQELEHQALIYK 25
8****************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MNGRNRFPFT PSQWQELEHQ ALIYKKIDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH 60
RGKNRSRKPV EVLKTTPSTN TNASTQQPIS SITKLNTLSP LASSESHQHH PPHYTSFLYH 120
HPPSSRSFED NSAPLFLDTG SCSQSNADCR SRYAYGEKEE VDEHAFFTEP CGIMKSFSAS 180
SMDDSWQLTP LAMSSSSSST KQRSSFGLSN DYSCLQLQSH SKQHEQQDQG GCYMLGGGQL 240
GKEEPQKTVH RFFDEWPHKG RQGSWLDLDD KSSTTQLSIS IPTSSHDFPA FSSRTHHDG*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
