 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang09g02600.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
MYB_related |
| Protein Properties |
Length: 326aa MW: 35391.4 Da PI: 5.9425 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang09g02600.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 28.7 | 3e-09 | 18 | 43 | 21 | 48 |
TT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 21 ggtWktIartmgkgRtlkqcksrwqkyl 48
+ W++Ia++++ Rt++++k++w++yl
Vang09g02600.1 18 AR-WSSIAKHLP-MRTDNEIKNYWNSYL 43
45.*********.*************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MVDNFLIHCI AFVFLVPARW SSIAKHLPMR TDNEIKNYWN SYLKRHYEKN DAYPSSSKPI 60
STASSTESKS SDLCMVPSKE TDCHGPNATP HQSNQSKLPK TMLSSTQLLN RVASKILSSG 120
YLEAIKSYQH VVAGKSNGDN SVVKTGIEVE KEGNRDPLVP NLTSSNHSVT CSAQLLNKMA 180
TSLPHKVHGL ESAKAVFSKL LESSEKGDSG SDGSFISSDQ IGECLNALSP FEDGPHITNV 240
VGSPSSPSLI FNQVTTPSCF SDNEDNWQNV SSNYVSFRHC APTAAECSVS ELNLGESSSS 300
TSCFLFENTD LGICDDEISK YIQYL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
