PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang09g01780.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 500aa    MW: 55473.4 Da    PI: 8.6198
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang09g01780.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.21.7e-23157213259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk ++ +++ + v+ei+Y+++H h+
  Vang09g01780.1 157 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCCAKK-IKFCDHSGYVIEIVYKSQHSHD 213
                     7********************************98.999999***************7 PP
2WRKY92.14.2e-29367424259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vkg+++ r+YYrCtsagCpv+k++e++ ++ k+v+itY+g H+h+
  Vang09g01780.1 367 SDGYRWRKYGQKLVKGNPHFRNYYRCTSAGCPVRKHIETAVDNAKTVIITYKGVHDHD 424
                     7********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-20150215IPR003657WRKY domain
SuperFamilySSF1182907.85E-20153215IPR003657WRKY domain
SMARTSM007742.3E-21156214IPR003657WRKY domain
PROSITE profilePS5081117.362157215IPR003657WRKY domain
PfamPF031067.6E-17158213IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-30351426IPR003657WRKY domain
PROSITE profilePS5081130.882361426IPR003657WRKY domain
SuperFamilySSF1182907.85E-26361426IPR003657WRKY domain
SMARTSM007741.3E-32366425IPR003657WRKY domain
PfamPF031061.6E-22368423IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
LSCTVMEEEE PMQQPLTDSS LTTHSSTSTA SDEEQPHSET LSLHSSSHMQ RSSTASKLGQ  60
DESKQSAQHS DEETIVKETV EAPQKQTESQ LQMSVCSTSS SKLSPTSVSM YLSSAPSSSV  120
PQQRPSPKAV KVQKMDKGTP SGDTTLSSVS VSRTSASDGY NWRKYGQKQV KSPTGSRSYY  180
RCTHSNCCAK KIKFCDHSGY VIEIVYKSQH SHDPPHIVDS TKESKFLPYS EPKIKCSIPK  240
QSSRVQIDSD PSSPRKPLYE SPCSANKNQE NSSHDENDKV LLKKEHVNDP EPKRRQVAYE  300
LIFFHRKFLR NLLFFLYMWL DVMSNALVLN MITRLNKGDL TCLDSAIKPG KKPKFVVHAA  360
EDMGISSDGY RWRKYGQKLV KGNPHFRNYY RCTSAGCPVR KHIETAVDNA KTVIITYKGV  420
HDHDMPVAKK RQGPPRASLV AAAAPASMKN LHFKKGGLVQ NEETSSAQCS EDTEDEALDL  480
GGEKAIESAR TLLSIGFEI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-24354426274WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang09g01780.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017420840.10.0PREDICTED: probable WRKY transcription factor 32
TrEMBLA0A0L9UCF70.0A0A0L9UCF7_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RH270.0A0A0S3RH27_PHAAN; Uncharacterized protein
STRINGXP_007138279.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.14e-95WRKY DNA-binding protein 32