 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang0959s00030.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
FAR1 |
| Protein Properties |
Length: 223aa MW: 25773.7 Da PI: 9.2781 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang0959s00030.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 57.2 | 5.5e-18 | 10 | 97 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90
+fY+ +Ak+ GFs+r +s+k+ ++ + i++r+f+C + g ++++++k r+++r++C kl ++k++ ++kw+vt +++ HnH+l
Vang0959s00030.1 10 NFYCLFAKTFGFSIRCGHSYKQnkNNIEDIYRREFTCHRAGVAKPKQRK-------RKSSRCNCSEKLLISKRTfgfKEKWMVTCFKNSHNHALL 97
6********************953334679**************98777.......99***************9999***************995 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 223 aa
Download sequence Send
to blast |
LFNSDTDAYN FYCLFAKTFG FSIRCGHSYK QNKNNIEDIY RREFTCHRAG VAKPKQRKRK 60
SSRCNCSEKL LISKRTFGFK EKWMVTCFKN SHNHALLDEK EVRFLPTYHD IPINGQARII 120
LLSKVGCSVS LIMRALEVEK GIEAGHLSFL DKDIRNFIQC QSSIGKKNDA SDVLKLCKGL 180
KDKDYAFQYD FTLVESNKLE HIIWVFGDSK RAYEFFWGCG CL*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
