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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang07g05460.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
HSF |
Protein Properties |
Length: 264aa MW: 30081.3 Da PI: 10.041 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang07g05460.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 109.5 | 2.5e-34 | 71 | 162 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96
Fl k+y ++ed+++++++sw+ +g++fvv+++ efa+++Lp++Fkhsnf+SFvRQLn+YgF+kv +++ weF ++ Fkkg++e+l++
Vang07g05460.1 71 FLLKTYMLVEDPATDNVVSWNVDGTAFVVWQPAEFARDLLPTFFKHSNFSSFVRQLNTYGFRKVATSR---------WEFFNERFKKGEREQLNE 156
9****************************************************************999.........****************** PP
XXXXXX CS
HSF_DNA-bind 97 ikrkks 102
i+r+k
Vang07g05460.1 157 IQRRKA 162
***985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 264 aa
Download sequence Send
to blast |
LWSRVGLLLL GLGVLNCPSS LLFLSSLLIF SFSSKPKTYH SFFLDRTTKM KITNNKGLLL 60 EGGRKSTPPP FLLKTYMLVE DPATDNVVSW NVDGTAFVVW QPAEFARDLL PTFFKHSNFS 120 SFVRQLNTYG FRKVATSRWE FFNERFKKGE REQLNEIQRR KAWSNKQQGN GANQVTAHDS 180 DEDQRSSSTS SSCGYSTLVD ENKRLKKENG VLNYELTSMK RKCKELVDLV AKYSSHAQEK 240 EEDERPMLFG VRLELARILG KSV*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |