 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang06g25510.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
NF-YC |
| Protein Properties |
Length: 442aa MW: 49359.5 Da PI: 8.5542 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang06g25510.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 135 | 2.2e-42 | 80 | 179 | 2 | 97 |
NF-YC 2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92
+k fw++q ie+ td++ +h++Pl+r+kki+k+d dvk +saeaPv+++kacelfi+elt+++w +ae+n+r+t+kksd+a+a++rtd+fdfl
Vang06g25510.1 80 VKCFWAQQlkeIEERTDLRnRHSIPLSRVKKIMKSDADVKLVSAEAPVVFAKACELFIMELTMKAWANAEDNNRSTIKKSDVASAIARTDVFDFL 174
789***9998899*****95689************************************************************************ PP
NF-YC 93 vdivp 97
di p
Vang06g25510.1 175 EDIAP 179
**987 PP
|
| 2 | NF-YC | 131.5 | 2.8e-41 | 302 | 402 | 2 | 100 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93
+k+fwe+q i++++d+k ++lPl+rikki+k+dedvkm+s+ea +ll kacelfi+elt+rsw h e+ kr+ ++k+d+a+a++ d+fdflv
Vang06g25510.1 302 VKTFWERQmkeIKESSDLK-NNLPLSRIKKIMKFDEDVKMVSSEATMLLGKACELFIMELTMRSWAHVEDDKRKIIQKTDVASAISMNDMFDFLV 395
699*****33334455665.58************************************************************************* PP
NF-YC 94 divprde 100
d+vprd+
Vang06g25510.1 396 DVVPRDD 402
*****97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 442 aa
Download sequence Send
to blast |
LDSIGVASME QNQHGQPGRG IGSAPAQEAH NKNHYQSKPT NPPIQTVGPS VPSPYPGEHH 60
SALGRMHRQQ QQQDQLEEKV KCFWAQQLKE IEERTDLRNR HSIPLSRVKK IMKSDADVKL 120
VSAEAPVVFA KACELFIMEL TMKAWANAED NNRSTIKKSD VASAIARTDV FDFLEDIAPI 180
PRVHKNTMMH PLLPGNAPTP TENVPYMPPP QHVASPPPPY VAATTLHQIP HALQTYPLAP 240
TVKMDQNQRR EAGKRIGGAP AQADGGKKQA VGVPVASPYA GGYRYDRQCI YQRQQEQLQQ 300
RVKTFWERQM KEIKESSDLK NNLPLSRIKK IMKFDEDVKM VSSEATMLLG KACELFIMEL 360
TMRSWAHVED DKRKIIQKTD VASAISMNDM FDFLVDVVPR DDTVPVMAGQ QGPCYPVIFP 420
SVNGEKTFCI PNAFINVTQT L*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
