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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang06g24890.1 |
Common Name | LR48_Vigan02g016400 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
NF-YA |
Protein Properties |
Length: 367aa MW: 40057.3 Da PI: 7.3248 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang06g24890.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 96 | 4.2e-30 | 161 | 217 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
d+p +VNaKQy++I++RRq+Rak+ e+kl +k rkpy+heSRh hA+rRpRg+gGrF
Vang06g24890.1 161 DAPTFVNAKQYHGIIRRRQSRAKAVLENKL-IKRRKPYMHESRHLHAMRRPRGNGGRF 217
579***************************.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 367 aa
Download sequence Send
to blast |
LKMAMQTAYL KEHEGIVHNS VGQLSSGTSA PWWNGLGSQP VYGDYCGQNK PFSLEFSNYI 60 DPFAGGKQAV RGAEPVIDRG HATQFSIFPE ECKMLGDAQN PQPAIGLQPS LAEPTNNFDI 120 GFNQPMMCAP YPCMEQFCAI TAYGPQISGR IMLPHNMASD DAPTFVNAKQ YHGIIRRRQS 180 RAKAVLENKL IKRRKPYMHE SRHLHAMRRP RGNGGRFLNT RNSNNGNGGN DSEVNNMGGL 240 QFLSSASQSS EMLQSDVGIN SPMETDECSP NMSSTEVNSM FSREGFDGFS VNPLGSSVLP 300 LGSPVYPLGS SVHSLTNLVV LENFVLSDLG KPFLAKLRPF IPGSPHSAKA FHDMDVLYMV 360 MAMQST*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 175 | 194 | RRRQSRAKAVLENKLIKRRK |
2 | 175 | 195 | RRRQSRAKAVLENKLIKRRKP |
3 | 176 | 195 | RRQSRAKAVLENKLIKRRKP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |