PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g15530.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 408aa    MW: 44380.9 Da    PI: 7.8541
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g15530.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.4e-29188245359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     Dg++WrKYGqK  kg+++pr+YYrCt+a gCpv+k+v+r++ed++v+++tYeg+Hnh+
  Vang06g15530.1 188 DGCQWRKYGQKISKGNPCPRAYYRCTMAlGCPVRKQVQRCTEDKSVLITTYEGNHNHP 245
                     9********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-32171247IPR003657WRKY domain
SuperFamilySSF1182908.24E-27180247IPR003657WRKY domain
PROSITE profilePS5081129.356181247IPR003657WRKY domain
SMARTSM007746.7E-35186246IPR003657WRKY domain
PfamPF031067.4E-26188245IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MENHRQMQQH RRQITLLGST NLDLDSTTVN TVKELDFFSS TSPSNHTHTD NLHHLPSNIP  60
KDNGPLPLFT DQFVNTTLNL MCPSQSDELS RSAAIDQNLK SPKVEKKEMM SVHHLMDPQS  120
CTKLDAKVVA SVSDDKSSQE AHPDRVEDVI EQSSSKSPKF EESKPGEPPL RRTRVSVRAR  180
SEAPVICDGC QWRKYGQKIS KGNPCPRAYY RCTMALGCPV RKQVQRCTED KSVLITTYEG  240
NHNHPLPPSA TVMANSTSAA ATMFLSSSGS ITSNEALNNS VGVFSSMYLS ASAPFPTITL  300
DMTNNNPMQL HRDTSSFPLH ATTFPQLPGH PIIFPHKLQH SLGQKQPSFI TDIMTAAVAS  360
NPNFTVALAA AISSIIGAPR SNDANNIYSN NGGNVLALGT SMLPGST*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A9e-21177247877Probable WRKY transcription factor 4
2ayd_A7e-21173248175WRKY transcription factor 1
2lex_A9e-21177247877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g15530.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017414241.10.0PREDICTED: probable WRKY transcription factor 47 isoform X1
SwissprotQ9XEC32e-68WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A0S3SQW20.0A0A0S3SQW2_PHAAN; Uncharacterized protein
STRINGXP_007145091.11e-180(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.19e-67WRKY family protein