PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g11490.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 738aa    MW: 83627.7 Da    PI: 6.8349
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g11490.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.37.5e-24213257145
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSST CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedp 45 
                     +dDgy+WrKYGqK++kg+ fpr+YY+Cts+gC+v+k+ver++++ 
  Vang06g11490.1 213 VDDGYRWRKYGQKTIKGNLFPRAYYKCTSSGCSVRKHVERDSRNR 257
                     59**************************************99775 PP
2WRKY93.81.3e-29531589159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +dDgy+WrKYGqK++kg+ fpr+YY+Ct+ gC+vkk+ver+++++k ++ tYeg+Hnhe
  Vang06g11490.1 531 VDDGYHWRKYGQKPIKGNLFPRAYYKCTTVGCSVKKHVERDSRNQKNLISTYEGRHNHE 589
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.1E-22207257IPR003657WRKY domain
PROSITE profilePS5081123.847208258IPR003657WRKY domain
SuperFamilySSF1182908.37E-20210256IPR003657WRKY domain
SMARTSM007743.5E-21213268IPR003657WRKY domain
PfamPF031065.2E-19214256IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-28519592IPR003657WRKY domain
PROSITE profilePS5081130.687526591IPR003657WRKY domain
SuperFamilySSF1182905.1E-25527591IPR003657WRKY domain
SMARTSM007743.0E-33531590IPR003657WRKY domain
PfamPF031063.8E-23532589IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    Send to blast
MSAFVENNSL QHDHTNQISE PNFHGLSSKP NCSQQKRVID FDLNEPEIDA MASPPLMDNN  60
LVPISQVSAD NVPVATEGCQ TLATTSDLLP PTQVIEQVHS SNSNHDITVK FPFDLNAEFD  120
EEDSISRTEE ARHKVVETIP TLPSTHSELT PQDVPPTDMD NEDRASVVEG GTATSETRKR  180
KKSTEGEYEK VHARSFRGKT LTVNVESRRR TIVDDGYRWR KYGQKTIKGN LFPRAYYKCT  240
SSGCSVRKHV ERDSRNRKNP AQHRLHTLEL FRNGSVWPFG SFNMNITSSS YTTQMHYSSF  300
LNSTNTMPYR FYGLDLNRFA APQTEFPMPP PFNIPSSSQV FSIGSSFNFH HTMSTSIENK  360
HHQINETTAI NSAERGFHKE RRDLDFDLNE PMININLVPN SQVCNDNCDV LGPPKKAVEQ  420
VHSSNSNDVK KVEFPFDLNA KFDEEDQISC SKEVGGWSET IQPLPSSYLE EVDEEHVLPT  480
DNGNEDRSSV VGGASNTSQN RFCAFKHICR GKGFRRENVE VKIKRQNQNT VDDGYHWRKY  540
GQKPIKGNLF PRAYYKCTTV GCSVKKHVER DSRNQKNLIS TYEGRHNHEQ PNPSKQYIHD  600
EEDEQLAAVA AANALLTFGS PGTRNFFNTP KPPVHTLQLL PNHTNPEFFN MFIRSNPFGS  660
FNYNMNIGSS YTPPMHYSSF LNNVITMPYG LNLARYVPPP FNIPFSFEGF SQDWMNANGS  720
SSVFRCRETS ARDRSCH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-232125911577Probable WRKY transcription factor 4
2lex_A6e-232125911577Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177181RKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g11490.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017410911.10.0PREDICTED: probable WRKY transcription factor 71, partial
TrEMBLA0A0S3SQ100.0A0A0S3SQ10_PHAAN; Uncharacterized protein
STRINGXP_007143973.11e-132(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1873256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.13e-23WRKY DNA-binding protein 4