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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang06g07640.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
Trihelix |
Protein Properties |
Length: 222aa MW: 26391.2 Da PI: 10.1417 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang06g07640.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 95.1 | 6.5e-30 | 107 | 188 | 5 | 87 |
trihelix 5 qevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
+ev+aLi++r+++e++++++ k+plWe++s+ m + g++rs+k+Ckekwen+nk++kk+ke++k r e+s+tcpyf++l+a
Vang06g07640.1 107 SEVHALIRLRTSLETKYQENGPKAPLWEDISAGMLRLGYNRSAKRCKEKWENINKYFKKVKESSKHR-RENSKTCPYFQELDA 188
69***************************************************************87.78889*******985 PP
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Protein Features
? help Back to Top |
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF13837 | 5.6E-21 | 107 | 189 | No hit | No description |
CDD | cd12203 | 8.82E-22 | 107 | 167 | No hit | No description |
Sequence ? help Back to Top |
Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MNNLFSTTST SSSTASDEDL EEKYRKKRKW KDYFRRLTRQ VLAKQEEMQK RFLEAIDKRE 60 REHVAQQEAW RILEMARINR EHELLVQERS TAAAKNAAVI AFLQQLSEVH ALIRLRTSLE 120 TKYQENGPKA PLWEDISAGM LRLGYNRSAK RCKEKWENIN KYFKKVKESS KHRRENSKTC 180 PYFQELDAIY KEKSKSQNPF GVSFLNMKPH EMMEPLMVQP EQ
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |