PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 313aa MW: 34562.3 Da PI: 6.635

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang06g07550.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.5	1.4e-08	166	208	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 k+++r NRe+A +s +RKk ++ eL++ v+ Le + + L + Vang06g07550.1 166 KKAKRILANRESAAKSKERKKRYLIELQKNVELLEIQITNLFN 208 899*******************************988777665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.001	162	226	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	2.0E-7	164	213	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.76	164	214	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.7E-7	166	214	No hit	No description
SuperFamily	SSF57959	4.1E-9	166	214	No hit	No description
CDD	cd14703	9.14E-15	167	218	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence Send to blast
MENNDIGAPS DASLFDQIVA TEQPYIPIHS DPSYPLLDTF VDLLNVDTKH FDFEMFNSPL 60 PPPPPPTAPL VSVHSETSEK PNEQSSKPAP VGSTDGLDSG KSVVSDDLCM AGGAKNSGEN 120 KQKPRRQNVP LDASLTALMQ AGPAISLARR PMGPEELAEL AMVDPKKAKR ILANRESAAK 180 SKERKKRYLI ELQKNVELLE IQITNLFNNI CLLQMGNRGR ALHVKEVRVK LDIMREEDRI 240 KDALSVVLNG EIQGLKDENR NLDVLLSCRF QGNIFSPFSS KLPLQQFHNP PSQQHLNPQQ 300 PQLSRGHYGP NI*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang06g07550.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015041	0.0	AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017414204.1	0.0	PREDICTED: transcription factor VIP1
TrEMBL	A0A0L9TZP2	0.0	A0A0L9TZP2_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3SNG6	0.0	A0A0S3SNG6_PHAAN; Uncharacterized protein
STRING	XP_007143526.1	1e-70	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF17276	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40620.1	4e-26	bZIP family protein

Publications ? help Back to Top
Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024]