 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Vang06g04340.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
Family |
Trihelix |
Protein Properties |
Length: 223aa MW: 25172.3 Da PI: 9.1134 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang06g04340.1 | genome | SNU | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 65.8 | 9.3e-21 | 14 | 75 | 25 | 86 |
trihelix 25 klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+ +p+W++vs+++r++g++r+p+qC+++w+nl+++ykkike+e++ ++es s +++ ++l+
Vang06g04340.1 14 GQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREESDSFWVMRNDLR 75
4779*******************************************9999999*9999986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MRRGRTAGLP LGSGQVEPKW ASVSSYCRKH GVNRGPVQCR KRWSNLAGDY KKIKEWESQI 60 REESDSFWVM RNDLRRDRKL PGFFDKEVYD ILDSGSQDFE QDEVSASPEK KDIFPPSNRD 120 FPAPIPISGV TNEKQSTPNP EMGSTSQGER KRKRLSTDGG EETLQIHLID VLERNGKMLS 180 AQLEAQNINF QLDREQRKIN GSNLVAVLDK LADALGRIAD KL*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 1e-160 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |