 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Vang06g02440.2 |
Common Name | LR48_Vigan02g237100 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
Family |
LBD |
Protein Properties |
Length: 179aa MW: 19601.7 Da PI: 9.5192 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang06g02440.2 | genome | SNU | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 97.8 | 1.1e-30 | 2 | 101 | 1 | 95 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
+C++C+vlr++C+++C+l+ ++ p++q++++ +v+k+FG++ ++++l+a+p ++r+++++sl+yeA r+ +Pv+Gavg+++++++ql+q+
Vang06g02440.2 2 SCNGCRVLRKGCSENCMLRHCLqlienPQAQAHATLFVAKFFGRAALMSFLSAVPANQRSALFQSLLYEAVGRTINPVNGAVGLLWSGNWQLCQM 96
6*********************************************************************************************9 PP
DUF260 91 kaela 95
+e +
Vang06g02440.2 97 GVEKV 101
88765 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 179 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSENCMLR HCLQLIENPQ AQAHATLFVA KFFGRAALMS FLSAVPANQR 60 SALFQSLLYE AVGRTINPVN GAVGLLWSGN WQLCQMGVEK VLRGGAVLTP LPHFLSSVDV 120 HHQHHVTERV MIAGGTLCHQ AKKQRVGTPS QESETSYMGR KPQDSAPQSQ RNLLTLFF*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |