PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g08750.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family HB-other
Protein Properties Length: 349aa    MW: 39664.3 Da    PI: 7.8868
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g08750.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.11.4e-08283330754
                     --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     ++k  +++Le++++k++ p+ +++  + + ++++ ++V  WF  +Ra 
  Vang05g08750.1 283 LKKVHVDTLERVYRKSKRPTNAMISSIVHVTNIPRKRVVKWFEDKRAE 330
                     56677899**************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.135274334IPR001356Homeobox domain
SuperFamilySSF466895.56E-8276337IPR009057Homeodomain-like
CDDcd000861.09E-6280329No hitNo description
SMARTSM003894.3E-4280338IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.4E-6282329IPR009057Homeodomain-like
PfamPF000464.5E-6283330IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MSAAFQCLSC ARTEPFLLRP AQSLTLPFQR KPFFCSLPLS SRARNLSSSI VAASSKKKKN  60
KKKLSRHHVT EGGEEDMDAF ELLFNQLEQD LKRGDLSDDD GEDGITEEEM ALLEHICGYG  120
DSGVHLSVTR WPYVFWFWPS LLDSKWIEWA VVDGQISSFP HRGCAFVHDG QWSDGISSPF  180
RGGRRDRSLR LSRVVTGTEI KNLAADLCLD RALVLQLLRE PPPNLLMMSL TIPDEPATTV  240
VSLETKPSEI LLQETSIDQV ESEPEAKVPV HTLQRNWYAQ KRLKKVHVDT LERVYRKSKR  300
PTNAMISSIV HVTNIPRKRV VKWFEDKRAE EGVPDHRLPY QRYVPETA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang05g08750.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-173AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017419740.10.0PREDICTED: protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBLA0A0L9UHG61e-179A0A0L9UHG6_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RCD91e-179A0A0S3RCD9_PHAAN; Uncharacterized protein
STRINGXP_007137036.11e-151(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101813138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.13e-55overexpressor of cationic peroxidase 3