PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang05g08750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | HB-other | ||||||||
Protein Properties | Length: 349aa MW: 39664.3 Da PI: 7.8868 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.1 | 1.4e-08 | 283 | 330 | 7 | 54 |
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++k +++Le++++k++ p+ +++ + + ++++ ++V WF +Ra Vang05g08750.1 283 LKKVHVDTLERVYRKSKRPTNAMISSIVHVTNIPRKRVVKWFEDKRAE 330 56677899**************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 9.135 | 274 | 334 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 5.56E-8 | 276 | 337 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 1.09E-6 | 280 | 329 | No hit | No description |
SMART | SM00389 | 4.3E-4 | 280 | 338 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 1.4E-6 | 282 | 329 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 4.5E-6 | 283 | 330 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002229 | Biological Process | defense response to oomycetes | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009682 | Biological Process | induced systemic resistance | ||||
GO:0009787 | Biological Process | regulation of abscisic acid-activated signaling pathway | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:2000022 | Biological Process | regulation of jasmonic acid mediated signaling pathway | ||||
GO:2000071 | Biological Process | regulation of defense response by callose deposition | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MSAAFQCLSC ARTEPFLLRP AQSLTLPFQR KPFFCSLPLS SRARNLSSSI VAASSKKKKN 60 KKKLSRHHVT EGGEEDMDAF ELLFNQLEQD LKRGDLSDDD GEDGITEEEM ALLEHICGYG 120 DSGVHLSVTR WPYVFWFWPS LLDSKWIEWA VVDGQISSFP HRGCAFVHDG QWSDGISSPF 180 RGGRRDRSLR LSRVVTGTEI KNLAADLCLD RALVLQLLRE PPPNLLMMSL TIPDEPATTV 240 VSLETKPSEI LLQETSIDQV ESEPEAKVPV HTLQRNWYAQ KRLKKVHVDT LERVYRKSKR 300 PTNAMISSIV HVTNIPRKRV VKWFEDKRAE EGVPDHRLPY QRYVPETA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang05g08750.1 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015035 | 1e-173 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017419740.1 | 0.0 | PREDICTED: protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 | ||||
TrEMBL | A0A0L9UHG6 | 1e-179 | A0A0L9UHG6_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3RCD9 | 1e-179 | A0A0S3RCD9_PHAAN; Uncharacterized protein | ||||
STRING | XP_007137036.1 | 1e-151 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10181 | 31 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 3e-55 | overexpressor of cationic peroxidase 3 |