PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g00760.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family TALE
Protein Properties Length: 678aa    MW: 74377.9 Da    PI: 6.8137
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g00760.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.27.4e-104204571954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +e++ LA+++gLt +qV++WF N R +
  Vang05g00760.1 420 FEHflHPYPKDSEKTMLARQTGLTRSQVSNWFINARVR 457
                     664559******************************88 PP
2BELL112.91.8e-36283354172
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     e+q+l+kk akL s+l+eVd rYkqy++++q v+ssF++vag+g+akpYt+lAl++iS hFrcL+d i++qi
  Vang05g00760.1 283 EKQDLHKKLAKLRSMLDEVDSRYKQYYQKMQNVVSSFDVVAGCGAAKPYTALALQTISCHFRCLRDSITGQI 354
                     6799******************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.0E-47201352IPR006563POX domain
PfamPF075262.0E-45207351IPR006563POX domain
PROSITE profilePS5007112.438398461IPR001356Homeobox domain
SMARTSM003895.4E-10401465IPR001356Homeobox domain
CDDcd000863.65E-13401462No hitNo description
SuperFamilySSF466892.1E-17402467IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-28404467IPR009057Homeodomain-like
PfamPF059203.0E-18418457IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    Send to blast
LPKIMATYNP CSSNQRGAVP MLCLREPLHN SYPETPILPS NMTLLYMNSG SYSEALPGNS  60
QQQSNCFVVP SPSVGASNST AEQQEILANI GGYQIGVHDF SAWREGRSEM LVRQSIDGHN  120
LQGQGLSLSL GTHMPSGIQL PSVHDRNHCS NLDSFLGANP SLSANEIYQN GSSRHSENFP  180
PVLPEASHDL NKADFSFPGI SSVGRTVPTS KYLKAVQQLL DEVVDIRQAI KRPETRSHGT  240
HENSPKNSKE GGELLENERP SATGVPNSQV SASNSSCELS HAEKQDLHKK LAKLRSMLDE  300
VDSRYKQYYQ KMQNVVSSFD VVAGCGAAKP YTALALQTIS CHFRCLRDSI TGQIRATQKS  360
LGEHDASESN KGVGMARLKY VDHQVRQQRA LQQLGMMQHA WRPQRGLPES SVSILRAWLF  420
EHFLHPYPKD SEKTMLARQT GLTRSQVSNW FINARVRLWK PMIEDMYKQD VSDVDMDSTS  480
SSENVSKATK SDVKISNDTV DDSQHCQSPI VTDTNHGGGQ AKDFGYDQVL DTKIMASTGL  540
ASHEVETEHR SGKQSGEKRP NLDNCGLFSD NMIVQSDRAT NDDRFIAVGS TCQMSEFESF  600
KSGSGVSLTL GLQHCEGGNF LPGETHLSLV SMKENGIYRS AGAASTVGVH TAELEHVGAG  660
NQRQRFSSPH MLHDFVV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A2e-17407464158Homeobox protein Meis1
4xrs_B2e-17407464158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang05g00760.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014501265.10.0BEL1-like homeodomain protein 6
RefseqXP_014501267.10.0BEL1-like homeodomain protein 6
RefseqXP_014501269.10.0BEL1-like homeodomain protein 6
TrEMBLA0A0S3RAJ90.0A0A0S3RAJ9_PHAAN; Uncharacterized protein
STRINGXP_007135942.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21463179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.21e-113BEL1-like homeodomain 6