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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0537s00020.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
MYB_related |
Protein Properties |
Length: 383aa MW: 41659.9 Da PI: 10.0407 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0537s00020.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 43.7 | 6.2e-14 | 172 | 216 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
Vang0537s00020.1 172 PWTEEEHRLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKY 216
8*******************************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009733 | Biological Process | response to auxin |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009739 | Biological Process | response to gibberellin |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0031540 | Biological Process | regulation of anthocyanin biosynthetic process |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0080167 | Biological Process | response to karrikin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003682 | Molecular Function | chromatin binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
HKHQCHHHTF NTSTLPKQNS LYITQTSLCL FLSLHHKHKP NNTLSSFKPF ISSPYIITSI 60 NLPHTYHIHI AIFIAWTVEM SRTCSQCGNN GHNSRTCTDG GAAVSGGSSP RESGFMLFGV 120 RVTEGISSFR KSASMNNLSQ YDADSNTADA GYASDDVVHA SGRARERKRG VPWTEEEHRL 180 FLLGLHKVGK GDWRGISRNF VKTRTPTQVA SHAQKYFLRR HNQNRRRRRS SLFDITTDTV 240 MESSTIMEEE QVQQETAALP IPAAYPPSHY GGLPGAGFPM SLSPVVLPAS SERLAKPIRP 300 TPILPVPPSS KMASLNLKEK ASPTNLIEPL PLSLNLPSPT PRSQDQSPAS SDHSSPSSSS 360 SAFQVISAGK FGGGGDSIIS VA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |