PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g16950.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 277aa    MW: 31615.2 Da    PI: 5.0755
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g16950.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86.1e-3077135259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YY+C+++ gC++kk+ver+++d ++++itY+++Hnh+
  Vang04g16950.1  77 SDFWSWRKYGQKPIKGSPYPRGYYKCSTSkGCSAKKQVERCRTDASMLIITYTSTHNHP 135
                     699***********************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-3169137IPR003657WRKY domain
PROSITE profilePS5081131.86971137IPR003657WRKY domain
SuperFamilySSF1182907.19E-2674137IPR003657WRKY domain
SMARTSM007743.2E-3576136IPR003657WRKY domain
PfamPF031064.2E-2578135IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
LPLKTSISQT KLAPKQHKHI AMDTDANASS QPESEAFSEL KSSETQTSKK RKLVEKTVVA  60
VRIGENVGKL KNEGLPSDFW SWRKYGQKPI KGSPYPRGYY KCSTSKGCSA KKQVERCRTD  120
ASMLIITYTS THNHPCPTTT NSPQQPKEYE SETTQELSKE EDQEHTEEEQ RDDKPIDEGR  180
NEEKFLYLQS PIRCSQDIII EQEDPFKLNT EKNHERIDLL LEEEEPLCYA QAKNMSGSKS  240
EELDFFDELE ELPMSSSFLH FTRSIFSDER IPVAPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-21771381780Disease resistance protein RRS1
5w3x_D1e-21771381780Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g16950.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195560.0EU019556.1 Glycine max WRKY8 (WRKY8) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017417329.10.0PREDICTED: probable WRKY transcription factor 69 isoform X2
TrEMBLA0A0L9U9X90.0A0A0L9U9X9_PHAAN; Uncharacterized protein
STRINGGLYMA19G40470.11e-149(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-36WRKY DNA-binding protein 35