PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang04g05780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | TALE | ||||||||
Protein Properties | Length: 713aa MW: 77092.8 Da PI: 6.9294 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.8 | 8.8e-09 | 420 | 452 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gLt +qV++WF N R + Vang04g05780.1 420 SSYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 452 68*****************************88 PP | |||||||
2 | BELL | 94.5 | 9.8e-31 | 252 | 337 | 1 | 72 |
BELL 1 erqelqkkkakLlsllee..............VdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+ +l+e V++rY+qy++q+++v+ssFe++ag+gsa+ Yt+lAl++iS++FrcLkdaia+q+ Vang04g05780.1 252 ERQEIQMKKAKLIAMLDEkdyeglivvdcmvvVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQV 337 79***************88888888888888799*************************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 4.9E-54 | 179 | 335 | IPR006563 | POX domain |
Pfam | PF07526 | 5.6E-45 | 186 | 334 | IPR006563 | POX domain |
SMART | SM00389 | 7.3E-7 | 383 | 460 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.45E-9 | 383 | 457 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 3.5E-24 | 386 | 462 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 5.7E-13 | 420 | 452 | IPR008422 | Homeobox KN domain |
SuperFamily | SSF46689 | 6.42E-12 | 420 | 463 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 10.738 | 420 | 456 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 713 aa Download sequence Send to blast |
LLYQKPMATY FHHGNSEIQS GAADGLQTLV LMNPGYIHYS DAPSQPPPSH AAGNLVFLNP 60 AAVAGANSNG SFNPHAPPSH TQQFVGIPLP ASQDLNHHSM HGHHDVSALH GFLPRMQYNH 120 WNALDPASAA RDTPRAQQGL SLGLGSFREG QAPGMSGDDL RVSGGSPSSA SGVTNNGASG 180 IQSVFLSSKY LKAAHELLEE VVNVNNGIGT ELGKKSGGQT KVIGESSAAG SGDGSVGGEG 240 NGKRNSELST AERQEIQMKK AKLIAMLDEK DYEGLIVVDC MVVVEQRYRQ YHQQMEIVVS 300 SFEQAAGIGS ARTYTALALQ TISKQFRCLK DAIAGQVRAA NKSLGEEDCF GGKIEGSRLK 360 YVDHHLRQQR ALQQLGMIQH NAWRPQRGLP ERSVSVLRAW LFEHFLHPFA SCAEITEFGS 420 SYPKDSDKHM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYLEEMKDHE QNGSEDKSSK 480 SNGDSSTKMA APAEKGPSNE TEAKSFSSKQ EVSKSQNTAM VSVSRPSTSP LGGSVRNQSG 540 FSFMGSSELE GITQGSPKKA RNHEMMHSPN SVPSMNIDVK PNEANNEQLS MKFGDERQGR 600 NESSFMGNQT NFIGGFGQYP IGDIGRFDAE QFAPRFSGNG VSLTLGLDSL PGTHQTFLPN 660 QNIQLGRSLD IGEPNEFGSI NNSSPHSSAA YESISMQNPK RFAAQLLPDF VT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang04g05780.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017418664.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_017418665.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_017418667.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 1e-167 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A0S3RZD6 | 0.0 | A0A0S3RZD6_PHAAN; Uncharacterized protein | ||||
STRING | XP_007162972.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1627 | 34 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-155 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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