PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g05780.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family TALE
Protein Properties Length: 713aa    MW: 77092.8 Da    PI: 6.9294
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g05780.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.88.8e-094204522254
                     SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     ++yp+ +++  LAk++gLt +qV++WF N R +
  Vang04g05780.1 420 SSYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 452
                     68*****************************88 PP

2BELL94.59.8e-31252337172
            BELL   1 erqelqkkkakLlsllee..............VdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     erqe+q+kkakL+ +l+e              V++rY+qy++q+++v+ssFe++ag+gsa+ Yt+lAl++iS++FrcLkdaia+q+
  Vang04g05780.1 252 ERQEIQMKKAKLIAMLDEkdyeglivvdcmvvVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQV 337
                     79***************88888888888888799*************************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.9E-54179335IPR006563POX domain
PfamPF075265.6E-45186334IPR006563POX domain
SMARTSM003897.3E-7383460IPR001356Homeobox domain
CDDcd000861.45E-9383457No hitNo description
Gene3DG3DSA:1.10.10.603.5E-24386462IPR009057Homeodomain-like
PfamPF059205.7E-13420452IPR008422Homeobox KN domain
SuperFamilySSF466896.42E-12420463IPR009057Homeodomain-like
PROSITE profilePS5007110.738420456IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 713 aa     Download sequence    Send to blast
LLYQKPMATY FHHGNSEIQS GAADGLQTLV LMNPGYIHYS DAPSQPPPSH AAGNLVFLNP  60
AAVAGANSNG SFNPHAPPSH TQQFVGIPLP ASQDLNHHSM HGHHDVSALH GFLPRMQYNH  120
WNALDPASAA RDTPRAQQGL SLGLGSFREG QAPGMSGDDL RVSGGSPSSA SGVTNNGASG  180
IQSVFLSSKY LKAAHELLEE VVNVNNGIGT ELGKKSGGQT KVIGESSAAG SGDGSVGGEG  240
NGKRNSELST AERQEIQMKK AKLIAMLDEK DYEGLIVVDC MVVVEQRYRQ YHQQMEIVVS  300
SFEQAAGIGS ARTYTALALQ TISKQFRCLK DAIAGQVRAA NKSLGEEDCF GGKIEGSRLK  360
YVDHHLRQQR ALQQLGMIQH NAWRPQRGLP ERSVSVLRAW LFEHFLHPFA SCAEITEFGS  420
SYPKDSDKHM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYLEEMKDHE QNGSEDKSSK  480
SNGDSSTKMA APAEKGPSNE TEAKSFSSKQ EVSKSQNTAM VSVSRPSTSP LGGSVRNQSG  540
FSFMGSSELE GITQGSPKKA RNHEMMHSPN SVPSMNIDVK PNEANNEQLS MKFGDERQGR  600
NESSFMGNQT NFIGGFGQYP IGDIGRFDAE QFAPRFSGNG VSLTLGLDSL PGTHQTFLPN  660
QNIQLGRSLD IGEPNEFGSI NNSSPHSSAA YESISMQNPK RFAAQLLPDF VT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g05780.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017418664.10.0PREDICTED: BEL1-like homeodomain protein 1
RefseqXP_017418665.10.0PREDICTED: BEL1-like homeodomain protein 1
RefseqXP_017418667.10.0PREDICTED: BEL1-like homeodomain protein 1
SwissprotQ9SJ561e-167BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBLA0A0S3RZD60.0A0A0S3RZD6_PHAAN; Uncharacterized protein
STRINGXP_007162972.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16273492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-155BEL1-like homeodomain 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]