PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g04330.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 568aa    MW: 62757 Da    PI: 6.8206
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g04330.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1048.1e-3391147259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vkgse+prsYY+Ct+++C vkkkvers+ d++++ei+Y+g+Hnh 
  Vang04g04330.1  91 EDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCLVKKKVERSH-DGQITEIIYKGNHNHV 147
                     7****************************************.***************6 PP
2WRKY102.42.5e-32302360159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v +tYeg+Hnhe
  Vang04g04330.1 302 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASHNLKYVLTTYEGKHNHE 360
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-2882149IPR003657WRKY domain
PROSITE profilePS5081123.80185149IPR003657WRKY domain
SuperFamilySSF1182909.94E-2588149IPR003657WRKY domain
SMARTSM007747.6E-3690148IPR003657WRKY domain
PfamPF031067.0E-2591146IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-35287362IPR003657WRKY domain
SuperFamilySSF1182904.32E-28295362IPR003657WRKY domain
PROSITE profilePS5081137.31297362IPR003657WRKY domain
SMARTSM007742.9E-37302361IPR003657WRKY domain
PfamPF031061.3E-24303360IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    Send to blast
MIYKIRICIK DHRFCLGNTI ISHHGEFLRD VNSSSLFCFE SVNLVDNLEL NSDESAVPKN  60
GINSEDIVGQ PASEGELKEA SHATGVVRTS EDGYNWRKYG QKQVKGSEYP RSYYKCTQPN  120
CLVKKKVERS HDGQITEIIY KGNHNHVKPH SSHRGSALST DEVSDMAEEG ALAKVDGGFM  180
WRNIQSGIKD SKNSLDWKAD GQERTSPTSG VTEISDPIST NKAKSLSMFE SEETPELSSS  240
LASHDMEEDG ATQAIVEDEA ENDESEPKRR KKENYAAESN LPPRSVREPR VVVQIESDVD  300
ILDDGYRWRK YGQKVVKGNP NPRSYYKCTS AGCMVRKHVE RASHNLKYVL TTYEGKHNHE  360
VPTARTNNQI NSSDGGLHPN GVNGQVGLAL PGSAGIKHET HQTLAHHFDR KPEFSNDFLR  420
PSLIGSFGSD MKFPPSSLCQ MKYPSLNNTM PYSSYGLNPD RCAAPQSGSI SSMFPDFPMP  480
LPLNLPSSGK FSIAGLNFNC AKPINPIQSF LSGQQVKDID AVFLRPKQEQ KDDAIYGSCI  540
PSLDANASLS SSAPPSIYQR VMKNFPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-3280362277Probable WRKY transcription factor 4
2lex_A3e-3280362277Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1266272PKRRKKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g04330.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017417355.10.0PREDICTED: probable WRKY transcription factor 33
TrEMBLA0A0L9U2H10.0A0A0L9U2H1_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RSF20.0A0A0S3RSF2_PHAAN; Uncharacterized protein
STRINGXP_007139725.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.13e-74WRKY DNA-binding protein 2